RNA–Protein interactions for RNA: ENST00000526977.5

VPS28-207, Transcript of VPS28, ESCRT-I subunit, humanhuman

TSL 5

Gene VPS28, Length 2,036 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS28-207ENST00000526977 PPIAL4DF5H284 164 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 PGLYRP1O75594 196 aaPredicted RBP15.71■□□□□ 0.11
VPS28-207ENST00000526977 RLN2P04090 185 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 PET100P0DJ07 73 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 PPIAL4FP0DN26 164 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 CD80P33681 288 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 UBA52P62987 128 aaKnown RBP15.71■□□□□ 0.11
VPS28-207ENST00000526977 FAM201AQ5SY85 155 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 FOXRED2Q8IWF2 684 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 ANGPTL6Q8NI99 470 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 ARPC5LQ9BPX5 153 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 SHARPINQ9H0F6 387 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 PPIAL4AQ9Y536 164 aa15.71■□□□□ 0.11
VPS28-207ENST00000526977 IGHV3OR15-7A0A075B7D8 119 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 LGALS8O00214 317 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 NMBP08949 121 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 RRASP10301 218 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 TMEM268Q5VZI3 342 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 SLC35G3Q8N808 338 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 BVESQ8NE79 360 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 OR10V1Q8NGI7 309 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 PPP1R35Q8TAP8 253 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 ZNF471Q9BX82 626 aaPredicted RBP15.7■□□□□ 0.1
VPS28-207ENST00000526977 DCAF16Q9NXF7 216 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 KCNIP1Q9NZI2 227 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 TMED3Q9Y3Q3 217 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 HRNRQ86YZ3 2850 aaPredicted RBP15.7■□□□□ 0.1
VPS28-207ENST00000526977 HSPA12AO43301 675 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 GABRA2P47869 451 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 LUMP51884 338 aaPredicted RBP15.7■□□□□ 0.1
VPS28-207ENST00000526977 SRPXP78539 464 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 STUMQ69YW2 141 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 COMMD7Q86VX2 200 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 SELENOHQ8IZQ5 122 aaKnown RBP15.7■□□□□ 0.1
VPS28-207ENST00000526977 AQP10Q96PS8 301 aa15.7■□□□□ 0.1
VPS28-207ENST00000526977 ARID1AO14497 2285 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 F5H0A9 414 aaPredicted RBP15.69■□□□□ 0.1
VPS28-207ENST00000526977 TNFSF12O43508 249 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 FSTL3O95633 263 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 CDS2O95674 445 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 IGLV2-14P01704 120 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 NUP62P37198 522 aaPredicted RBP15.69■□□□□ 0.1
VPS28-207ENST00000526977 CEACAM6P40199 344 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 ZNF561Q8N587 486 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 DEFB108BQ8NET1 73 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 SNX22Q96L94 193 aa15.69■□□□□ 0.1
VPS28-207ENST00000526977 RAI1Q7Z5J4 1906 aaPredicted RBP15.68■□□□□ 0.1
VPS28-207ENST00000526977 C12orf77C9JDV5 145 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 DEDDO75618 318 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 MBPP02686 304 aaPredicted RBP15.68■□□□□ 0.1
VPS28-207ENST00000526977 COL8A2P25067 703 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 UCP1P25874 307 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 GLIPR1P48060 266 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 ZNF695Q8IW36 515 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 OR1L1Q8NH94 360 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 SDSLQ96GA7 329 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 PARP12Q9H0J9 701 aaKnown RBP15.68■□□□□ 0.1
VPS28-207ENST00000526977 DNTTIP1Q9H147 329 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 KRBOX4Q5JUW0 171 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 OR52M1Q8NGK5 317 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 ZNF665Q9H7R5 613 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 CYTL1Q9NRR1 136 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 LRBAP50851 2863 aa15.68■□□□□ 0.1
VPS28-207ENST00000526977 OVOL3O00110 214 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 ZNF737O75373 536 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 F12P00748 615 aaPredicted RBP15.67■□□□□ 0.1
VPS28-207ENST00000526977 F2RP25116 425 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 PAX5Q02548 391 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 ZNF788Q6ZQV5 615 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 OR5D13Q8NGL4 314 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 GALMQ96C23 342 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 LSM5Q9Y4Y9 91 aaKnown RBP15.67■□□□□ 0.1
VPS28-207ENST00000526977 H0Y980 276 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 NDUFA2O43678 99 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 SCGB1D2O95969 90 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 OR8U9P0C7N5 309 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 HKR1P10072 659 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 DAOP14920 347 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 S100GP29377 79 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 CDKN1AP38936 164 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 TPRX1Q8N7U7 411 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 OR8U1Q8NH10 309 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 C14orf79Q96F83 325 aa15.67■□□□□ 0.1
VPS28-207ENST00000526977 K7EPK0 472 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 K7N7A8 449 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 HBZP02008 142 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 GYPAP02724 150 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 SMCO1Q147U7 214 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 FAM71E2Q8N5Q1 922 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 MRGPRDQ8TDS7 321 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 AKR1E2Q96JD6 320 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 CXorf58Q96LI9 332 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 FAM234AQ9H0X4 552 aa15.66■□□□□ 0.1
VPS28-207ENST00000526977 MGST3O14880 152 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 IL2RGP31785 369 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 EFNA4P52798 201 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 ZNRF1Q8ND25 227 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 OR4D5Q8NGN0 318 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 IGFBPL1Q8WX77 278 aa15.65■□□□□ 0.1
VPS28-207ENST00000526977 PHYHIPLQ96FC7 376 aa15.65■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms