RNA–Protein interactions for RNA: ENST00000522911.5

SDC2-207, Transcript of syndecan 2, humanhuman

TSL 3 BASIC

Gene SDC2, Length 677 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC2-207ENST00000522911 AIPO00170 330 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 ARPC1BO15143 372 aaKnown RBP7.3□□□□□ -1.24
SDC2-207ENST00000522911 SLC22A1O15245 554 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 NDUFA3O95167 84 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 CDRT1O95170 752 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 ECI1P42126 302 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 PSMD7P51665 324 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 ZNF134P52741 427 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 PPP3R1P63098 170 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 HTD2P86397 168 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 LTC4SQ16873 150 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 ZNF260Q3ZCT1 412 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 C19orf54Q5BKX5 351 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 CASC10Q5T4H9 136 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 SYT6Q5T7P8 510 aaPredicted RBP7.3□□□□□ -1.24
SDC2-207ENST00000522911 DDI2Q5TDH0 399 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 FAM71F2Q6NXP2 309 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 LYPD6Q86Y78 171 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 ANKRD13BQ86YJ7 626 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 SPARTQ8N0X7 666 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 TCTEX1D1Q8N7M0 179 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 NPBQ8NG41 125 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 SMIM19Q96E16 107 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 S100A13Q99584 98 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 DCUN1D5Q9BTE7 237 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 OR51J1Q9H342 316 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 RHBDL2Q9NX52 303 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 ZNF107Q9UII5 783 aaPredicted RBP7.3□□□□□ -1.24
SDC2-207ENST00000522911 RYR2Q92736 4967 aa7.3□□□□□ -1.24
SDC2-207ENST00000522911 STARD9Q9P2P6 4700 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 hCG_2014768A0A024R1R8 64 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 TRAV39A0A0B4J263 110 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 LOC100130705A0A1B0GUX0 176 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 MCRIP1C9JLW8 97 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 SLC31A2O15432 143 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 HBZP02008 142 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 SOX2P48431 317 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 RAB9AP51151 201 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 RAB25P57735 213 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 MMDQ15546 238 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 MORN2Q502X0 79 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 YIF1BQ5BJH7 314 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 FAM27D1Q5T7N8 215 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 DMKNQ6E0U4 476 aaPredicted RBP7.29□□□□□ -1.24
SDC2-207ENST00000522911 XAF1Q6GPH4 301 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 TMEM65Q6PI78 240 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 TMPRSS11AQ6ZMR5 421 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 ODF3L1Q8IXM7 274 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 ZBTB8BQ8NAP8 495 aaPredicted RBP7.29□□□□□ -1.24
SDC2-207ENST00000522911 OR1N2Q8NGR9 330 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 FCGR1BQ92637 280 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 MUL1Q969V5 352 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 KLK15Q9H2R5 256 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 GNG12Q9UBI6 72 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 JPT1Q9UK76 154 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 ING4Q9UNL4 249 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 ERGIC3Q9Y282 383 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 TENM2Q9NT68 2774 aa7.29□□□□□ -1.24
SDC2-207ENST00000522911 SORL1Q92673 2214 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 TRBV5-7A0A0A0MS05 114 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 IGHV7-81A0A0B4J1V7 117 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 IRGMA1A4Y4 181 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 A8MZ25 164 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 YPEL1O60688 119 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 SERPINA2P20848 420 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 FUT3P21217 361 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 ACTBP60709 375 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 RPS11P62280 158 aaKnown RBP eCLIP7.28□□□□□ -1.24
SDC2-207ENST00000522911 C5orf64Q2M2E5 130 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 TRIM16LQ309B1 348 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 ZIK1Q3SY52 487 aaPredicted RBP7.28□□□□□ -1.24
SDC2-207ENST00000522911 Q499Y3 187 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 SLC22A6Q4U2R8 563 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 ATAD3CQ5T2N8 411 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 ZNF660Q6AZW8 331 aaPredicted RBP7.28□□□□□ -1.24
SDC2-207ENST00000522911 RAB12Q6IQ22 244 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 ACSM6Q6P461 480 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 CD200R1LQ6Q8B3 271 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 ZNF833PQ6ZTB9 187 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 ZNF485Q8NCK3 441 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 FBLIM1Q8WUP2 373 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 CCDC107Q8WV48 283 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 APH1BQ8WW43 257 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 THRSPQ92748 146 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 Q96M66 194 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 RCHY1Q96PM5 261 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 YPEL2Q96QA6 119 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 OR14A2Q96R54 314 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 NABP2Q9BQ15 211 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 CST11Q9H112 138 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 GHITMQ9H3K2 345 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 GNB4Q9HAV0 340 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 AMBNQ9NP70 447 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 TPSG1Q9NRR2 321 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 BABAM2Q9NXR7 383 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 CKLFQ9UBR5 152 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 GHRLQ9UBU3 117 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 AASSQ9UDR5 926 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 TRAPPC2LQ9UL33 140 aa7.28□□□□□ -1.24
SDC2-207ENST00000522911 MRPS28Q9Y2Q9 187 aaKnown RBP7.28□□□□□ -1.24
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms