RNA–Protein interactions for RNA: ENST00000522843.5

SDCBP-210, Transcript of syndecan binding protein, humanhuman

TSL 2

Gene SDCBP, Length 764 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDCBP-210ENST00000522843 NLKQ9UBE8 527 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 RABL2AQ9UBK7 228 aaPredicted RBP5.14□□□□□ -1.59
SDCBP-210ENST00000522843 RABL2BQ9UNT1 228 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 SLC22A13Q9Y226 551 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 POLR1DQ9Y2S0 133 aa5.14□□□□□ -1.59
SDCBP-210ENST00000522843 DSCAML1Q8TD84 2053 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 PNMA8CA0A1B0GUJ8 204 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 LDLRAD4O15165 306 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 OR2F2O95006 317 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 NPSP0C0P6 89 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 OCM2P0CE71 109 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 IGHV1-8P0DP01 117 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 SLC2A1P11166 492 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 RAB3BP20337 219 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 CALRP27797 417 aaKnown RBP5.13□□□□□ -1.59
SDCBP-210ENST00000522843 DDOSTP39656 456 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 GABRA2P47869 451 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 PPP5CP53041 499 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 TPTEP56180 551 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 RPL31P62899 125 aaKnown RBP5.13□□□□□ -1.59
SDCBP-210ENST00000522843 FAM3AP98173 230 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 MFGE8Q08431 387 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-210ENST00000522843 MZT1Q08AG7 82 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 FHL3Q13643 280 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 INSL4Q14641 139 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 TAF13Q15543 124 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 FAM76BQ5HYJ3 339 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 DGAT2L7PQ6IED9 249 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 CFAP161Q6P656 301 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 TCF23Q7RTU1 214 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 C16orf82Q7Z2V1 217 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 LRRTM1Q86UE6 522 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 NR2C2APQ86WQ0 139 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 SERPINA12Q8IW75 414 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 RDH10Q8IZV5 341 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF676Q8N7Q3 588 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 RBM14Q96PK6 669 aaKnown RBP5.13□□□□□ -1.59
SDCBP-210ENST00000522843 SLC25A33Q9BSK2 321 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 PLGRKTQ9HBL7 147 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF319Q9P2F9 582 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 LINC00527Q9UJ94 153 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 UBE2J1Q9Y385 318 aaPredicted RBP5.13□□□□□ -1.59
SDCBP-210ENST00000522843 RHBDD3Q9Y3P4 386 aa5.13□□□□□ -1.59
SDCBP-210ENST00000522843 TNCP24821 2201 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 hCG_38984A0A1B0GV85 526 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 IFITM5A6NNB3 132 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 ANKRD30BLA7E2S9 258 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 AIPO00170 330 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 CTDSP2O14595 271 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 MTRF1O75570 445 aaKnown RBP5.12□□□□□ -1.59
SDCBP-210ENST00000522843 CD2P06729 351 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 CALCBP10092 127 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 SPNP16150 400 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 MYL9P24844 172 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 HSD11B1P28845 292 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 TNFSF8P32971 234 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 S100A5P33763 92 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 PCP4P48539 62 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 CX3CR1P49238 355 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 CAPZA1P52907 286 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF121P58317 390 aaPredicted RBP5.12□□□□□ -1.59
SDCBP-210ENST00000522843 TIRAPP58753 221 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 ZNF846Q147U1 533 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 KIR2DS1Q14954 304 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 BAK1Q16611 211 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 C9orf152Q5JTZ5 239 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 C1orf100Q5SVJ3 147 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 BCL2L15Q5TBC7 163 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 ASPHD1Q5U4P2 390 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 TMEM42Q69YG0 159 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 SFXN4Q6P4A7 337 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 UTS2BQ765I0 119 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 IZUMO1Q8IYV9 350 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 OR5D14Q8NGL3 314 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 HPSE2Q8WWQ2 592 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 TMEM106AQ96A25 262 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 PTX4Q96A99 478 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 SGK3Q96BR1 496 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 GFI1Q99684 422 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 MIXL1Q9H2W2 232 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 HMG20AQ9NP66 347 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 PPP1R14DQ9NXH3 145 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 KIAA1456Q9P272 454 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 SPATA2Q9UM82 520 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 V9GY05 133 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 V9GYS6 101 aa5.12□□□□□ -1.59
SDCBP-210ENST00000522843 PKD1P98161 4303 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 SYT7O43581 403 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 DHRS3O75911 302 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 LY6G6CO95867 125 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 APOA1P02647 267 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 IGHV4-30-4P0DP06 118 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 GP9P14770 177 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 GLRA1P23415 457 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 MNDAP41218 407 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 PRKXP51817 358 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 PPP3R1P63098 170 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 FAM27D1Q5T7N8 215 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 DDI2Q5TDH0 399 aa5.11□□□□□ -1.59
SDCBP-210ENST00000522843 MINOS1Q5TGZ0 78 aa5.11□□□□□ -1.59
Retrieved 100 of 20,778 RNA–protein pairs in 82.1 ms