RNA–Protein interactions for RNA: ENST00000520944.5

SNHG6-203, Transcript of small nucleolar RNA host gene 6, humanhuman

TSL 1 (best) BASIC

Gene SNHG6, Length 638 nt, Biotype lincRNA, Subcellular localisation Cytoplasm, Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG6-203ENST00000520944 OR6M1Q8NGM8 313 aa16.13■□□□□ 0.17
SNHG6-203ENST00000520944 IL1F10Q8WWZ1 152 aa16.13■□□□□ 0.17
SNHG6-203ENST00000520944 TMEM203Q969S6 136 aa16.13■□□□□ 0.17
SNHG6-203ENST00000520944 CYYR1Q96J86 154 aa16.13■□□□□ 0.17
SNHG6-203ENST00000520944 BPNT1O95861 308 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 RPLP1P05386 114 aaKnown RBP16.12■□□□□ 0.17
SNHG6-203ENST00000520944 ELANEP08246 267 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 BLVRBP30043 206 aaPredicted RBP16.12■□□□□ 0.17
SNHG6-203ENST00000520944 HOXD3P31249 432 aaPredicted RBP16.12■□□□□ 0.17
SNHG6-203ENST00000520944 AQP4P55087 323 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 KRTAP10-11P60412 298 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 LY6G6FQ5SQ64 297 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 SETD6Q8TBK2 473 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 RBMXL1Q96E39 390 aaKnown RBP16.12■□□□□ 0.17
SNHG6-203ENST00000520944 HSPB9Q9BQS6 159 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 ZNF251Q9BRH9 671 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 TM2D1Q9BX74 207 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 PLGRKTQ9HBL7 147 aa16.12■□□□□ 0.17
SNHG6-203ENST00000520944 ZNF107Q9UII5 783 aaPredicted RBP16.12■□□□□ 0.17
SNHG6-203ENST00000520944 K7EIL1 84 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 CCL24O00175 119 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 OR5H8P0DN80 308 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 SLC2A2P11168 524 aaPredicted RBP16.11■□□□□ 0.17
SNHG6-203ENST00000520944 MYF6P23409 242 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 RAB25P57735 213 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 EGFEM1PQ0D2K5 195 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 UNC119Q13432 240 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 IRF3Q14653 427 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 TRAM1Q15629 374 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 HMGN3Q15651 99 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 P2RX4Q99571 388 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 NICN1Q9BSH3 213 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 URM1Q9BTM9 101 aaKnown RBP16.11■□□□□ 0.17
SNHG6-203ENST00000520944 CCDC90BQ9GZT6 254 aa16.11■□□□□ 0.17
SNHG6-203ENST00000520944 RIMS4Q9H426 269 aaPredicted RBP16.11■□□□□ 0.17
SNHG6-203ENST00000520944 ZMAT5Q9UDW3 170 aaKnown RBP16.11■□□□□ 0.17
SNHG6-203ENST00000520944 TMEM14DPA8MWL7 114 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 RGS10O43665 173 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 ARL6IP5O75915 188 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 IGF1P05019 195 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 CD37P11049 281 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 ARSBP15848 533 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 CDX1P47902 265 aaPredicted RBP16.1■□□□□ 0.17
SNHG6-203ENST00000520944 ACTBP60709 375 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 TPBGQ13641 420 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 LCNL1Q6ZST4 164 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 ODF3L1Q8IXM7 274 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 OR8U1Q8NH10 309 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 NRG4Q8WWG1 115 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 RAX2Q96IS3 184 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 DUX3Q96PT4 197 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 NABP2Q9BQ15 211 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 CHCHD6Q9BRQ6 235 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 MRPL20Q9BYC9 149 aaKnown RBP16.1■□□□□ 0.17
SNHG6-203ENST00000520944 KCNK15Q9H427 330 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 DUSP21Q9H596 190 aa16.1■□□□□ 0.17
SNHG6-203ENST00000520944 NAPSAO96009 420 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 IGHG4P01861 327 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 PSMA1P25786 263 aaKnown RBP16.09■□□□□ 0.17
SNHG6-203ENST00000520944 OR3A3P47888 321 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 QRFPP83859 136 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 KIR2DS1Q14954 304 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 P2RY14Q15391 338 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 ZNF833PQ6ZTB9 187 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 MOB1BQ7L9L4 216 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 SVOPQ8N4V2 548 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 RNF152Q8N8N0 203 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 KCTD7Q96MP8 289 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 ISYNA1Q9NPH2 558 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 PIPOXQ9P0Z9 390 aa16.09■□□□□ 0.17
SNHG6-203ENST00000520944 SAA2-SAA4A0A096LPE2 208 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 WI2-2373I1.2A0A1W2PRP0 233 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 RAB29O14966 203 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 SAA2P0DJI9 122 aaPredicted RBP16.08■□□□□ 0.16
SNHG6-203ENST00000520944 RANBP1P43487 201 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 TMEM65Q6PI78 240 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 LPAR5Q9H1C0 372 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 VCX3BQ9H321 246 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 KIAA1456Q9P272 454 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 ZNF580Q9UK33 172 aa16.08■□□□□ 0.16
SNHG6-203ENST00000520944 AK6Q9Y3D8 172 aaKnown RBP16.08■□□□□ 0.16
SNHG6-203ENST00000520944 SLC17A2O00624 439 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 NBR2O15453 112 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 ST8SIA5O15466 376 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 SOCS1O15524 211 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 RPS25P62851 125 aaKnown RBP16.07■□□□□ 0.16
SNHG6-203ENST00000520944 CFHR3Q02985 330 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 MLLT11Q13015 90 aaPredicted RBP16.07■□□□□ 0.16
SNHG6-203ENST00000520944 RAB11BQ15907 218 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 LIN54Q6MZP7 749 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 FAM71F2Q6NXP2 309 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 ZNF880Q6PDB4 577 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 TMEM91Q6ZNR0 172 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 RITA1Q96K30 269 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 ANKRD60Q9BZ19 345 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 GHITMQ9H3K2 345 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 SLC23A1Q9UHI7 598 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 MGAT4AQ9UM21 535 aa16.07■□□□□ 0.16
SNHG6-203ENST00000520944 A0A0A6YYD4 124 aa16.06■□□□□ 0.16
SNHG6-203ENST00000520944 HLA-DRB1P01911 266 aa16.06■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms