RNA–Protein interactions for RNA: ENST00000520410.2

IGHV3-42-201, Transcript of immunoglobulin heavy variable 3-42 (pseudogene), humanhuman

BASIC

Gene IGHV3-42, Length 361 nt, Biotype IG V pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
IGHV3-42-201ENST00000520410 KIAA1456Q9P272 454 aa12.7□□□□□ -0.38
IGHV3-42-201ENST00000520410 TPRKBQ9Y3C4 175 aa12.7□□□□□ -0.38
IGHV3-42-201ENST00000520410 WI2-2373I1.2A0A1W2PRP0 233 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 CCL24O00175 119 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 ST8SIA5O15466 376 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 SRMP19623 302 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 CHATP28329 748 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 SLC6A1P30531 599 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 OR3A3P47888 321 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 ACTBP60709 375 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 TMEM65Q6PI78 240 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 LRRTM1Q86UE6 522 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 OR8U1Q8NH10 309 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 PHYHIPQ92561 330 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 URM1Q9BTM9 101 aaKnown RBP12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 MBNL3Q9NUK0 354 aaKnown RBP12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 NKX1-2Q9UD57 310 aaPredicted RBP12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 WSB1Q9Y6I7 421 aa12.69□□□□□ -0.38
IGHV3-42-201ENST00000520410 SAA2-SAA4A0A096LPE2 208 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 HSPA12AO43301 675 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 SAA2P0DJI9 122 aaPredicted RBP12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 OR5H8P0DN80 308 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 ZNF137PP52743 207 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 CD69Q07108 199 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 FOXE3Q13461 319 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 LYPD6Q86Y78 171 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 GAPTQ8N292 157 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 FAM71E2Q8N5Q1 922 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 OR6M1Q8NGM8 313 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 OR5M8Q8NGP6 311 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 RAX2Q96IS3 184 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 KCTD7Q96MP8 289 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 PLSCR3Q9NRY6 295 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 LRRC42Q9Y546 428 aa12.68□□□□□ -0.38
IGHV3-42-201ENST00000520410 H7C2Y5 167 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 NBR2O15453 112 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 RGS10O43665 173 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 YPEL1O60688 119 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 BPNT1O95861 308 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 ELANEP08246 267 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 ARSBP15848 533 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 CNTFRP26992 372 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 RPS25P62851 125 aaKnown RBP12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 HTD2P86397 168 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 HMGN3Q15651 99 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 ECSCRQ19T08 205 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 C1orf100Q5SVJ3 147 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 STEAP3Q658P3 488 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 ZNF554Q86TJ5 538 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 YPEL2Q96QA6 119 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 OR5B12Q96R08 314 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 NABP2Q9BQ15 211 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 SLC23A1Q9UHI7 598 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 AK6Q9Y3D8 172 aaKnown RBP12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 A3GALT2U3KPV4 340 aa12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 PRKDCP78527 4128 aaKnown RBP12.67□□□□□ -0.38
IGHV3-42-201ENST00000520410 ARL6IP5O75915 188 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 LUMP51884 338 aaPredicted RBP12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 GP2P55259 537 aaKnown RBP12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 MRPS15P82914 257 aaKnown RBP12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 UNC119Q13432 240 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 RAB11BQ15907 218 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 FAM131AQ6UXB0 335 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 MOB1BQ7L9L4 216 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 SVOPQ8N4V2 548 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 P2RX4Q99571 388 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 HDHD3Q9BSH5 251 aaPredicted RBP12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 PIPOXQ9P0Z9 390 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 ZMAT5Q9UDW3 170 aaKnown RBP12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 AK3Q9UIJ7 227 aa12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 LSM2Q9Y333 95 aaKnown RBP12.66□□□□□ -0.38
IGHV3-42-201ENST00000520410 SLC22A1O15245 554 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 ATP6V0E1O15342 81 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 SOCS1O15524 211 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 GSTP1P09211 210 aaKnown RBP12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 UCHL1P09936 223 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 CALRP27797 417 aaKnown RBP12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 VEGFCP49767 419 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 CLDN12P56749 244 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 DGCR2P98153 550 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 TRAM1Q15629 374 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 RPL39P5Q59GN2 51 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 RNLSQ5VYX0 342 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 GLDNQ6ZMI3 551 aaPredicted RBP12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 ODF3L1Q8IXM7 274 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 TM2D1Q9BX74 207 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 ANKRD60Q9BZ19 345 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 VCX3BQ9H321 246 aa12.65□□□□□ -0.38
IGHV3-42-201ENST00000520410 TRAV41A0A0B4J266 112 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 TMEM14DPA8MWL7 114 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 SEC14L6B5MCN3 397 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 G3V318 75 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 RAB29O14966 203 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 LY86O95711 162 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 MAP2K4P45985 399 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 CDX1P47902 265 aaPredicted RBP12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 HLA-DRB3P79483 266 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 EGFEM1PQ0D2K5 195 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 C9orf66Q5T8R8 295 aa12.64□□□□□ -0.39
IGHV3-42-201ENST00000520410 LIN54Q6MZP7 749 aa12.64□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms