RNA–Protein interactions for RNA: ENST00000520234.1

HMGB1P41-201, Transcript of high mobility group box 1 pseudogene 41, humanhuman

BASIC

Gene HMGB1P41, Length 440 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P41-201ENST00000520234 FAHD2BQ6P2I3 314 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 NIPAL3Q6P499 406 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ULK3Q6PHR2 472 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM184AQ6ZMB5 413 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 MBOAT2Q6ZWT7 520 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 Q7L0L9 218 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC35E3Q7Z769 313 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 LHFPL4Q7Z7J7 247 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF573Q86YE8 665 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 RBM45Q8IUH3 476 aaKnown RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 TRAPPC5Q8IUR0 188 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRSS58Q8IYP2 241 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF619Q8N2I2 560 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR2L13Q8N349 312 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 GTPBP8Q8N3Z3 284 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM24BQ8N5W8 94 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 COMMD1Q8N668 190 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ACBD7Q8N6N7 88 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 CSNK1A1LQ8N752 337 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 BCORP1Q8N888 145 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 LINC01555Q8NAE3 123 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 NOXO1Q8NFA2 376 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 BBS1Q8NFJ9 593 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5T3Q8NGG3 340 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR51G2Q8NGK0 314 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5L2Q8NGL0 311 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5AR1Q8NGP9 310 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5W2Q8NH69 310 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5AK3PQ8NH89 298 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 NT5CQ8TCD5 201 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 GPX8Q8TED1 209 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PAQR8Q8TEZ7 354 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 MITD1Q8WV92 249 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 RGP1Q92546 391 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ISOC2Q96AB3 205 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 HAVCR1Q96D42 359 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAHD2AQ96GK7 314 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC35G5Q96KT7 338 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZFP3Q96NJ6 502 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRAP1Q96NZ9 151 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 AQP10Q96PS8 301 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 CNN2Q99439 309 aaKnown RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 C20orf144Q9BQM9 153 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 POTEKPQ9BYX7 375 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SELENOIQ9C0D9 397 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 COMMD4Q9H0A8 199 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC25A31Q9H0C2 315 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SYT4Q9H2B2 425 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRO1933Q9H354 126 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 TMEM185BQ9H7F4 350 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 KIR3DX1Q9H7L2 352 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 PRSS16Q9NQE7 514 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SLC2A8Q9NY64 477 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 DEC1Q9P2X7 70 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5V1Q9UGF6 321 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF223Q9UK11 482 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ASF1AQ9Y294 204 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF256Q9Y2P7 627 aaPredicted RBP2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 HEBP2Q9Y5Z4 205 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 KPTNQ9Y664 436 aa2.36□□□□□ -2.03
HMGB1P41-201ENST00000520234 SHANK1Q9Y566 2161 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 TRBV24-1A0A075B6N3 115 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 FAM230AA0A1W2PPH8 454 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 KANTRA0A1W2PQU2 76 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 EPOPA6NHQ4 379 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ANKRD30BLA7E2S9 258 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 HIDE1A8MVS5 230 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 HSBP1L1C9JCN9 74 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 H3BN98 237 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 M0R143 59 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 BHLHE40O14503 412 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CCL25O15444 150 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RRP8O43159 456 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 GGCTO75223 188 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RCBTB2O95199 551 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 DIRAS3O95661 229 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 GCGP01275 180 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OPN1LWP04000 364 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 GAPDHP04406 335 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 DBIP07108 87 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CXCL1P09341 107 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR5AC1P0C628 307 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 NBEAP1P0C6P0 100 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 OR8U9P0C7N5 309 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CALCBP10092 127 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 TPT1P13693 172 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 TBPP20226 339 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 CDK2P24941 298 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 G0S2P27469 103 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 S100A2P29034 98 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 NTSP30990 170 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 SNCAP37840 140 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 P2RY2P41231 377 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 AKR1C3P42330 323 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RBM34P42696 430 aaKnown RBP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 NCBP2P52298 156 aaKnown RBP eCLIP2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ZNF136P52737 540 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 ATP1B3P54709 279 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RIPPLY3P57055 190 aa2.35□□□□□ -2.03
HMGB1P41-201ENST00000520234 RGS8P57771 180 aaPredicted RBP2.35□□□□□ -2.03
Retrieved 100 of 20,778 RNA–protein pairs in 51.6 ms