RNA–Protein interactions for RNA: ENST00000518638.1

CCDC6-203, Transcript of coiled-coil domain containing 6, humanhuman

TSL 2

Gene CCDC6, Length 729 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC6-203ENST00000518638 COPS3Q9UNS2 423 aa4.65□□□□□ -1.67
CCDC6-203ENST00000518638 BAIAP2Q9UQB8 552 aa4.65□□□□□ -1.67
CCDC6-203ENST00000518638 A0A1W2PPI3 338 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 hDV102S1A0JD36 115 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 MEX3AA1L020 520 aaKnown RBP4.64□□□□□ -1.67
CCDC6-203ENST00000518638 FAM183AA6NL82 134 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF729A6NN14 1252 aaPredicted RBP4.64□□□□□ -1.67
CCDC6-203ENST00000518638 DHRS7CA6NNS2 312 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 NCBP2LA6PVI3 153 aaKnown RBP4.64□□□□□ -1.67
CCDC6-203ENST00000518638 CNIH1O95406 144 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 HAND1O96004 215 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 IFNGP01579 166 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 IGKV1D-33P01593 117 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 IGKV1-33P01594 117 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 IGLV1-51P01701 117 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 SPI1P17947 270 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 CD81P60033 236 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 EBI3Q14213 229 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 MAPRE2Q15555 327 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 IZUMO4Q1ZYL8 232 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 TNFAIP8L3Q5GJ75 292 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 SPIN3Q5JUX0 258 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 CLVS2Q5SYC1 327 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 LGALS9CQ6DKI2 356 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 LCN12Q6JVE5 192 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 LINC00336Q6ZUF6 198 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 ARPINQ7Z6K5 226 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 MREGQ8N565 214 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 RNF148Q8N7C7 305 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF491Q8N8L2 437 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 OR8B12Q8NGG6 310 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 OR2T10Q8NGZ9 312 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 ARPC1AQ92747 370 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 THRSPQ92748 146 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF488Q96MN9 340 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 KCTD7Q96MP8 289 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 EBF4Q9BQW3 602 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF286AQ9HBT8 521 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 RAB9BQ9NP90 201 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF319Q9P2F9 582 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 SLC7A11Q9UPY5 501 aa4.64□□□□□ -1.67
CCDC6-203ENST00000518638 RYR1P21817 5038 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 TRBV4-1A0A0J9YWV2 114 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 PQLC2LA1A4F0 135 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 PRSS46E5RG02 174 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 MMP23AO75900 390 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 DHRS3O75911 302 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 GADD45GO95257 159 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 CYB5AP00167 134 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 CSN2P05814 226 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 SMIM18P0DKX4 95 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 PSKH1P11801 424 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF3P17036 446 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 SEC61BP60468 96 aaKnown RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 GNB1P62873 340 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 MFGE8Q08431 387 aaPredicted RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 ZNF816Q0VGE8 651 aaPredicted RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 PPP1R8Q12972 351 aaKnown RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 BNIP1Q12981 228 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 TSPAN31Q12999 210 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 PLA2G7Q13093 441 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 RIPK1Q13546 671 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 SAMD4BQ5PRF9 694 aaKnown RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 METTL21CQ5VZV1 264 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 CEMP1Q6PRD7 247 aaPredicted RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 ERI1Q8IV48 349 aaKnown RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 RPP25LQ8N5L8 163 aaKnown RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 TCTEX1D1Q8N7M0 179 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 TPRX1Q8N7U7 411 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 SLC37A3Q8NCC5 494 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 OR51L1Q8NGJ5 315 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 OR10X1Q8NGY0 326 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 OR52I2Q8NH67 350 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 TSEN15Q8WW01 171 aaKnown RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 EMG1Q92979 244 aaKnown RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 DLX4Q92988 240 aaPredicted RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 TMEM106AQ96A25 262 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 SPAG8Q99932 426 aaPredicted RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 SIKE1Q9BRV8 207 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 TMED9Q9BVK6 235 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 GNB4Q9HAV0 340 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 SLC25A19Q9HC21 320 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 IL1RAPQ9NPH3 570 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 CNOT2Q9NZN8 540 aaKnown RBP4.63□□□□□ -1.67
CCDC6-203ENST00000518638 ERGIC3Q9Y282 383 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 WDR83OSQ9Y284 106 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 PIGLQ9Y2B2 252 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 WSB1Q9Y6I7 421 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 CDH10Q9Y6N8 788 aa4.63□□□□□ -1.67
CCDC6-203ENST00000518638 KIAA1109Q2LD37 5005 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 A0A1B0GUV1 79 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 FAM172BPA6NC97 362 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 RIIAD1A6NNX1 92 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 FXYD1O00168 92 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 NDUFAB1O14561 156 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 MRASO14807 208 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 LANCL1O43813 399 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 SCGB2A1O75556 95 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 MOSP00540 346 aa4.62□□□□□ -1.67
CCDC6-203ENST00000518638 GAPDHP04406 335 aaKnown RBP4.62□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms