RNA–Protein interactions for RNA: ENST00000518604.1

SQLE-202, Transcript of squalene epoxidase, humanhuman

TSL 2

Gene SQLE, Length 743 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SQLE-202ENST00000518604 MBOAT7Q96N66 472 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 TXNDC17Q9BRA2 123 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 TXNL4BQ9NX01 149 aaKnown RBP1.71□□□□□ -2.14
SQLE-202ENST00000518604 SBDSQ9Y3A5 250 aaKnown RBP eCLIP1.71□□□□□ -2.14
SQLE-202ENST00000518604 MRPS16Q9Y3D3 137 aaKnown RBP1.71□□□□□ -2.14
SQLE-202ENST00000518604 SNX10Q9Y5X0 201 aa1.71□□□□□ -2.14
SQLE-202ENST00000518604 A0A1W2PQL4 384 aaPredicted RBP1.7□□□□□ -2.14
SQLE-202ENST00000518604 TMEM213A2RRL7 107 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 LINC00862A6NCI5 91 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 ERICH4A6NGS2 130 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 F8VZ95 297 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 TRAPPC3O43617 180 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 SCN2BO60939 215 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 ZNF189O75820 626 aaPredicted RBP1.7□□□□□ -2.14
SQLE-202ENST00000518604 CD99P14209 185 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 CDK2P24941 298 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 AGTR1P30556 359 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 KRTAP12-1P59990 96 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 FGF12P61328 243 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 EIF4G1Q04637 1599 aaKnown RBP1.7□□□□□ -2.14
SQLE-202ENST00000518604 SLAMF1Q13291 335 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 XRCC4Q13426 336 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 FAM229BQ4G0N7 80 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 PCOTHQ58A44 107 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 DOLPP1Q86YN1 238 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 NATD1Q8N6N6 113 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 OR10A6Q8NH74 314 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 TNFAIP8L1Q8WVP5 186 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 TMBIM1Q969X1 311 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 CFAP53Q96M91 514 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 TTTY12Q9BZ98 90 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 CHMP4BQ9H444 224 aaKnown RBP1.7□□□□□ -2.14
SQLE-202ENST00000518604 GLS2Q9UI32 602 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 DNAJC12Q9UKB3 198 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 ADAMTS7Q9UKP4 1686 aa1.7□□□□□ -2.14
SQLE-202ENST00000518604 GOLGA8RI6L899 631 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 NEMFO60524 1076 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 ORM2P19652 201 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 CFL1P23528 166 aaKnown RBP1.69□□□□□ -2.14
SQLE-202ENST00000518604 OR1E2P47887 323 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 PSMD7P51665 324 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 DEFA6Q01524 100 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 C1DQ13901 141 aaKnown RBP1.69□□□□□ -2.14
SQLE-202ENST00000518604 SS18Q15532 418 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 KRTAP21-2Q3LI59 83 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 CLEC6AQ6EIG7 209 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 SELENOHQ8IZQ5 122 aaKnown RBP1.69□□□□□ -2.14
SQLE-202ENST00000518604 TMEM75Q8N9X5 138 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 OR11H1Q8NG94 326 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 MGLLQ99685 303 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 ZNF251Q9BRH9 671 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 CDCA4Q9BXL8 241 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 EIF5A2Q9GZV4 153 aaKnown RBP1.69□□□□□ -2.14
SQLE-202ENST00000518604 MED28Q9H204 178 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 C11orf1Q9H5F2 150 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 MS4A12Q9NXJ0 267 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 PSMD13Q9UNM6 376 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 ADAMTSL1Q8N6G6 1762 aa1.69□□□□□ -2.14
SQLE-202ENST00000518604 ITGB4P16144 1822 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 ATAD5Q96QE3 1844 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 IGHV3-73A0A0B4J1V6 119 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 MUC21A0A0G2JKD1 596 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 MUC21A0A140T8X8 626 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 GRIFINA4D1Z8 144 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 UBFD1O14562 309 aaKnown RBP1.68□□□□□ -2.14
SQLE-202ENST00000518604 STK16O75716 305 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 LY6HO94772 140 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 IGLV3-27P01718 113 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 CD7P09564 240 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 SLC25A16P16260 332 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 F8A1P23610 371 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 CASQ1P31415 396 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 PPP1CCP36873 323 aaKnown RBP1.68□□□□□ -2.14
SQLE-202ENST00000518604 ZNF140P52738 457 aaPredicted RBP1.68□□□□□ -2.14
SQLE-202ENST00000518604 DAD1P61803 113 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 FAM45BPQ6NSW5 357 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 RASL11AQ6T310 242 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 RNASE11Q8TAA1 199 aaKnown RBP1.68□□□□□ -2.14
SQLE-202ENST00000518604 STOML3Q8TAV4 291 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 C16orf78Q8WTQ4 265 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 ABHD14BQ96IU4 210 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 HHLA2Q9UM44 414 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 MYO9BQ13459 2157 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 LCTP09848 1927 aa1.68□□□□□ -2.14
SQLE-202ENST00000518604 DOCK6Q96HP0 2047 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 ADGRB3O60242 1522 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 COL4A2P08572 1712 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 M0QX08 132 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 TOX3O15405 576 aaPredicted RBP1.67□□□□□ -2.14
SQLE-202ENST00000518604 SOD1P00441 154 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 ZNHIT3Q15649 155 aaPredicted RBP1.67□□□□□ -2.14
SQLE-202ENST00000518604 FNDC9Q8TBE3 224 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 ACY3Q96HD9 319 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 OR7D2Q96RA2 312 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 TBX5Q99593 518 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 GNB1LQ9BYB4 327 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 METTL9Q9H1A3 318 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 FAM206AQ9NX38 181 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 SNX12Q9UMY4 172 aa1.67□□□□□ -2.14
SQLE-202ENST00000518604 MINOS1-NBL1R4GNA1 71 aa1.67□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 25.7 ms