RNA–Protein interactions for RNA: ENST00000517488.1

PDGFRB-202, Transcript of platelet derived growth factor receptor beta, humanhuman

TSL 3

Gene PDGFRB, Length 822 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDGFRB-202ENST00000517488 HSF4Q9ULV5 492 aa11.19□□□□□ -0.62
PDGFRB-202ENST00000517488 TRBV6-6A0A0A6YYG2 114 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 SMIM30A4D0T7 59 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 YPEL1O60688 119 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 RAB3BP20337 219 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 CD1BP29016 333 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 TCTEX1D4Q5JR98 221 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 CENPVQ7Z7K6 275 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 ODF3L1Q8IXM7 274 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 IL1F10Q8WWZ1 152 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 YPEL2Q96QA6 119 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 RIMS4Q9H426 269 aaPredicted RBP11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 TXNL4BQ9NX01 149 aaKnown RBP11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 ABRACLQ9P1F3 81 aa11.18□□□□□ -0.62
PDGFRB-202ENST00000517488 PRKDCP78527 4128 aaKnown RBP11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 FGF16O43320 207 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 LANCL1O43813 399 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 FGF9P31371 208 aaPredicted RBP11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 CD83Q01151 205 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 MOGAT2Q3SYC2 334 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 LY6G6FQ5SQ64 297 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 MOB1BQ7L9L4 216 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 NDUFA11Q86Y39 141 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 OR56B1Q8NGI3 324 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 OR2T10Q8NGZ9 312 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 PARP12Q9H0J9 701 aaKnown RBP11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 Q9N2K0 584 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 PLSCR3Q9NRY6 295 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 STUB1Q9UNE7 303 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 KCNK7Q9Y2U2 307 aa11.17□□□□□ -0.62
PDGFRB-202ENST00000517488 TET2Q6N021 2002 aaPredicted RBP11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 A0A1W2PRX2 142 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 LINC01548A6NM66 108 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 NCBP2LA6PVI3 153 aaKnown RBP11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 TXNL1O43396 289 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 KCNAB3O43448 404 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 WIPF1O43516 503 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 RGS11O94810 467 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 MOSP00540 346 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 SLC2A2P11168 524 aaPredicted RBP11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 RANBP1P43487 201 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 OR3A3P47888 321 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 LSAMPQ13449 338 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 Q8N9W7 124 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 OR2AK2Q8NG84 335 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 CMSS1Q9BQ75 279 aaKnown RBP11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 MRPL20Q9BYC9 149 aaKnown RBP11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 OR51E2Q9H255 320 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 IFI27L2Q9H2X8 130 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 C12orf4Q9NQ89 552 aa11.16□□□□□ -0.62
PDGFRB-202ENST00000517488 NOTCH3Q9UM47 2321 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 DNAH3Q8TD57 4116 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 ST8SIA5O15466 376 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 OPN1MWP04001 364 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 SCTP09683 121 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 OPN1MW2P0DN77 364 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 OPN1MW3P0DN78 364 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 F2RL1P55085 397 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 HLA-DRB3P79483 266 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 DEFA6Q01524 100 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 NEDD8Q15843 81 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 KCTD21Q4G0X4 260 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 R3HDM4Q96D70 268 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 RAB3CQ96E17 227 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 NOL4LQ96MY1 436 aaPredicted RBP11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 OR1A1Q9P1Q5 309 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 LINC00527Q9UJ94 153 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 SSR3Q9UNL2 185 aa11.15□□□□□ -0.62
PDGFRB-202ENST00000517488 SAA2-SAA4A0A096LPE2 208 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 IGKV1-6A0A0C4DH72 117 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 TCRBV4S1A1TA0A5B7 111 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 NOTOA8MTQ0 251 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 RAB27BO00194 218 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 IGHG2P01859 326 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 SAA2P0DJI9 122 aaPredicted RBP11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 GNB3P16520 340 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 RAB6AP20340 208 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 ZNF833PQ6ZTB9 187 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 SLC35E3Q7Z769 313 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 ZNF329Q86UD4 541 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 C1QL4Q86Z23 238 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 OR10R2Q8NGX6 335 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 RITA1Q96K30 269 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 S1PR3Q99500 378 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 NABP2Q9BQ15 211 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 ZNF251Q9BRH9 671 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 RNF167Q9H6Y7 350 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 SLC23A1Q9UHI7 598 aa11.14□□□□□ -0.63
PDGFRB-202ENST00000517488 A0A075B6Q4 140 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 PSMB11A5LHX3 300 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 SERPINE3A8MV23 424 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 TRDCB7Z8K6 153 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 MFNGO00587 321 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 CLEC2LP0C7M8 214 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 GADD45AP24522 165 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 CEACAM6P40199 344 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 GPR12P47775 334 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 RPL39P5Q59GN2 51 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 OR4X2Q8NGF9 303 aa11.13□□□□□ -0.63
PDGFRB-202ENST00000517488 ABHD14BQ96IU4 210 aa11.13□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms