RNA–Protein interactions for RNA: ENST00000515572.5

SNF8-215, Transcript of SNF8, ESCRT-II complex subunit, humanhuman

TSL 2

Gene SNF8, Length 687 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNF8-215ENST00000515572 BRS3P32247 399 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 PRSS3P35030 304 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 PPP1CCP36873 323 aaKnown RBP9.62□□□□□ -0.87
SNF8-215ENST00000515572 RAB7AP51149 207 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 ZNF137PP52743 207 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 UBA52P62987 128 aaKnown RBP9.62□□□□□ -0.87
SNF8-215ENST00000515572 KRTAP21-3Q3LHN1 58 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 CT45A1Q5HYN5 189 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 C5orf24Q7Z6I8 188 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 DYNAPQ8N1N2 210 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 OR10J5Q8NHC4 309 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 CT45A3Q8NHU0 189 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 FAM216AQ8WUB2 273 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 TOMM40LQ969M1 308 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 SSX3Q99909 188 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 ABHD14AQ9BUJ0 271 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 C6orf62Q9GZU0 229 aaPredicted RBP9.62□□□□□ -0.87
SNF8-215ENST00000515572 GHITMQ9H3K2 345 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 SCPEP1Q9HB40 452 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 ABCB10Q9NRK6 738 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 EXTL2Q9UBQ6 330 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 A3GALT2U3KPV4 340 aa9.62□□□□□ -0.87
SNF8-215ENST00000515572 TRBV6-7A0A0A0MS04 114 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 IGKV1-6A0A0C4DH72 117 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 A0A1W2PPE3 182 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 H3BUX3 64 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 CTDSP2O14595 271 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 SLC31A2O15432 143 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 TXNL1O43396 289 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 CEACAM6P40199 344 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 ZNF134P52741 427 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 RPL15P61313 204 aaKnown RBP9.61□□□□□ -0.87
SNF8-215ENST00000515572 HERPUD1Q15011 391 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 FAM53AQ6NSI3 398 aaPredicted RBP9.61□□□□□ -0.87
SNF8-215ENST00000515572 CNIH2Q6PI25 160 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 HOGA1Q86XE5 327 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 LAX1Q8IWV1 398 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 OR8H3Q8N146 312 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 DTX3Q8N9I9 347 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 BEST4Q8NFU0 473 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 MAFIPQ8WZ33 124 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 ST6GALNAC6Q969X2 333 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 GINS4Q9BRT9 223 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 DCUN1D5Q9BTE7 237 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 NXF2Q9GZY0 626 aaKnown RBP9.61□□□□□ -0.87
SNF8-215ENST00000515572 TOLLIPQ9H0E2 274 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 MIXL1Q9H2W2 232 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 IFT46Q9NQC8 304 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 OR1A1Q9P1Q5 309 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 RABL2AQ9UBK7 228 aaPredicted RBP9.61□□□□□ -0.87
SNF8-215ENST00000515572 ANXA10Q9UJ72 324 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 VPREB3Q9UKI3 123 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 RABL2BQ9UNT1 228 aa9.61□□□□□ -0.87
SNF8-215ENST00000515572 MRPS7Q9Y2R9 242 aaKnown RBP9.61□□□□□ -0.87
SNF8-215ENST00000515572 IGKV1D-8A0A087WSZ0 117 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 SULT1C2O00338 296 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 HSD17B6O14756 317 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 BET1O15155 118 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 GAPDHP04406 335 aaKnown RBP9.6□□□□□ -0.87
SNF8-215ENST00000515572 PTHLHP12272 177 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 ZNF816Q0VGE8 651 aaPredicted RBP9.6□□□□□ -0.87
SNF8-215ENST00000515572 IGSF11Q5DX21 431 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 FAM71F2Q6NXP2 309 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 C16orf87Q6PH81 154 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 LIAT1Q6ZQX7 453 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 LYG1Q8N1E2 194 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 RTN4IP1Q8WWV3 396 aaPredicted RBP9.6□□□□□ -0.87
SNF8-215ENST00000515572 TMEM158Q8WZ71 300 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 DUX5Q96PT3 197 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 CHIAQ9BZP6 476 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 MMP27Q9H306 513 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 RDH8Q9NYR8 311 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 PIPOXQ9P0Z9 390 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 PITPNC1Q9UKF7 332 aa9.6□□□□□ -0.87
SNF8-215ENST00000515572 SVEP1Q4LDE5 3571 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 A0A1W2PPI3 338 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 RAB29O14966 203 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 LANCL1O43813 399 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 PAX6P26367 422 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 ARPC4P59998 168 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 PLA1AQ53H76 456 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 SNX29P2Q8IUI4 249 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 PIFOQ8TCI5 191 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 GPX8Q8TED1 209 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 DIRAS2Q96HU8 199 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 AGMATQ9BSE5 352 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 C11orf54Q9H0W9 315 aaPredicted RBP9.59□□□□□ -0.87
SNF8-215ENST00000515572 IFI27L2Q9H2X8 130 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 RAB18Q9NP72 206 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 TNFRSF19Q9NS68 423 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 ANAPC10Q9UM13 185 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 TCF19Q9Y242 345 aa9.59□□□□□ -0.87
SNF8-215ENST00000515572 IGHV1-3A0A0C4DH29 117 aa9.58□□□□□ -0.88
SNF8-215ENST00000515572 MEIS3P1A6NDR6 274 aa9.58□□□□□ -0.88
SNF8-215ENST00000515572 CRYBA1P05813 215 aa9.58□□□□□ -0.88
SNF8-215ENST00000515572 FAM106CPP0CH98 169 aa9.58□□□□□ -0.88
SNF8-215ENST00000515572 NAT1P18440 290 aa9.58□□□□□ -0.88
SNF8-215ENST00000515572 S100A5P33763 92 aa9.58□□□□□ -0.88
SNF8-215ENST00000515572 MRPS10P82664 201 aaKnown RBP9.58□□□□□ -0.88
SNF8-215ENST00000515572 SRSF2Q01130 221 aaKnown RBP9.58□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 56.4 ms