RNA–Protein interactions for RNA: ENST00000514610.1

HMGCS1-207, Transcript of 3-hydroxy-3-methylglutaryl-CoA synthase 1, humanhuman

TSL 2

Gene HMGCS1, Length 555 nt, Biotype retained intron, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCS1-207ENST00000514610 ZNF117Q03924 483 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 PMS2P3Q13401 168 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 ANGPT1Q15389 498 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 SYCE1Q8N0S2 351 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 PPWD1Q96BP3 646 aaKnown RBP1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 CFAP53Q96M91 514 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 TTTY12Q9BZ98 90 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 SMDT1Q9H4I9 107 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 PSORS1C2Q9UIG4 136 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 LINC00527Q9UJ94 153 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 PTPRJQ12913 1337 aa1.89□□□□□ -2.11
HMGCS1-207ENST00000514610 SLIT2O94813 1529 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 HSBP1L1C9JCN9 74 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 IGKV1-16P04430 117 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 ADORA1P30542 326 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 LINC00313P59037 77 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 ZNHIT3Q15649 155 aaPredicted RBP1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 RNASE11Q8TAA1 199 aaKnown RBP1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 ERMNQ8TAM6 284 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 TNFAIP8L1Q8WVP5 186 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 ZNF251Q9BRH9 671 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 MED18Q9BUE0 208 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 BBS2Q9BXC9 721 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 FIS1Q9Y3D6 152 aa1.88□□□□□ -2.11
HMGCS1-207ENST00000514610 ERICH2A1L162 156 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 LY6HO94772 140 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 NPPAP01160 153 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 LPAR6P43657 344 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 AKR1C2P52895 323 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 RWDD2BP57060 319 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 SLC35A2P78381 396 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 TMED1Q13445 227 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 C1DQ13901 141 aaKnown RBP1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 KRTAP13-4Q3LI77 160 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 BLIDQ8IZY5 108 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 TXNDC17Q9BRA2 123 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 C11orf1Q9H5F2 150 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 C1orf109Q9NX04 203 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 FAM206AQ9NX38 181 aa1.87□□□□□ -2.11
HMGCS1-207ENST00000514610 LINC00854A0A1B0GVQ3 168 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 LY6LH3BQJ8 138 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 LIN7AO14910 233 aaPredicted RBP1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 TRAPPC3O43617 180 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 SCN2BO60939 215 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 ADAP1O75689 374 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 PVALBP20472 110 aaPredicted RBP1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 CDK2P24941 298 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 ZNF140P52738 457 aaPredicted RBP1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 TSPEAR-AS2P59090 65 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 FGF12P61328 243 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 MESTQ5EB52 335 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 SPATA31B1PQ5VZV4 182 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 RASL11AQ6T310 242 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 SLC13A5Q86YT5 568 aaPredicted RBP1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 OR11H1Q8NG94 326 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 OR5AK3PQ8NH89 298 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 DNAJC30Q96LL9 226 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 CDCA4Q9BXL8 241 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 CXCL16Q9H2A7 254 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 ARHGAP32A7KAX9 2087 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 DSCAML1Q8TD84 2053 aa1.86□□□□□ -2.11
HMGCS1-207ENST00000514610 LRPPRCP42704 1394 aaKnown RBP1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 PLCH2O75038 1416 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 IGHV3-73A0A0B4J1V6 119 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 MUC21A0A0G2JKD1 596 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 MUC21A0A140T8X8 626 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 OR13C7P0DN81 318 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 ESDP10768 282 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 GRPRP30550 384 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 AGTR1P30556 359 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 OR1E2P47887 323 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 EXOC3L4Q17RC7 722 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 PLCZ1Q86YW0 608 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 CRLF3Q8IUI8 442 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 ATP6V1C2Q8NEY4 427 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 OR10A6Q8NH74 314 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 ACY3Q96HD9 319 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 ABHD14BQ96IU4 210 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 TRNT1Q96Q11 434 aaKnown RBP1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 TBX5Q99593 518 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 GPR22Q99680 433 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 GNB1LQ9BYB4 327 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 DNAJC12Q9UKB3 198 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 COL4A2P08572 1712 aa1.85□□□□□ -2.11
HMGCS1-207ENST00000514610 A0A1W2PQL4 384 aaPredicted RBP1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 LINC00862A6NCI5 91 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 TRPC5OSA6NMA1 111 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 ARL6IP5O75915 188 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 S1PR2O95136 353 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 DAPP51397 102 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 C4orf26Q17RF5 130 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 LGALS9CQ6DKI2 356 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 FAM45BPQ6NSW5 357 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 C16orf78Q8WTQ4 265 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 ZNF426Q9BUY5 554 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 MED28Q9H204 178 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 UBQLN4Q9NRR5 601 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 TXNL4BQ9NX01 149 aaKnown RBP1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 ALG5Q9Y673 324 aa1.84□□□□□ -2.11
HMGCS1-207ENST00000514610 MPDZO75970 2070 aa1.84□□□□□ -2.12
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms