RNA–Protein interactions for RNA: ENST00000514344.5

CHD1-211, Transcript of chromodomain helicase DNA binding protein 1, humanhuman

TSL 5

Gene CHD1, Length 2,955 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD1-211ENST00000514344 LINC00311Q8N616 119 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 NPBQ8NG41 125 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 OR8D4Q8NGM9 314 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 OR14K1Q8NGZ2 314 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 CNN2Q99439 309 aaKnown RBP2.33□□□□□ -2.04
CHD1-211ENST00000514344 NICN1Q9BSH3 213 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 TSSK6Q9BXA6 273 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 YTHDF1Q9BYJ9 559 aaKnown RBP2.33□□□□□ -2.04
CHD1-211ENST00000514344 NMNAT2Q9BZQ4 307 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 RNF167Q9H6Y7 350 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 LINC00574Q9H8X3 128 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 NEK6Q9HC98 313 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 ARMC1Q9NVT9 282 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 GFOD1Q9NXC2 390 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 SNX5Q9Y5X3 404 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 ENPP4Q9Y6X5 453 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 S4R3C0 116 aa2.33□□□□□ -2.04
CHD1-211ENST00000514344 SNNO75324 88 aaPredicted RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 GADD45GO95257 159 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 IGHV3-23P01764 117 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 HTN3P15516 51 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 BLVRAP53004 296 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 ATP1B3P54709 279 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 RHOGP84095 191 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 RSBN1Q5VWQ0 802 aaPredicted RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 EPGNQ6UW88 154 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 C15orf53Q8NAA6 179 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 CHST4Q8NCG5 386 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 NEK7Q8TDX7 302 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 ATG101Q9BSB4 218 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 COMMD4Q9H0A8 199 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 ADGRL4Q9HBW9 690 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 SSU72Q9NP77 194 aaKnown RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 AKIP1Q9NQ31 210 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 NDUFAF4Q9P032 175 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 FRRS1LQ9P0K9 344 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 ZNF581Q9P0T4 197 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 NUFIP1Q9UHK0 495 aaKnown RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 ZNF230Q9UIE0 474 aaPredicted RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 TMED3Q9Y3Q3 217 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 CDH10Q9Y6N8 788 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 V9GYS6 101 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 IGKV3-7A0A075B6H7 116 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 TRAV24A0A0B4J272 114 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 A0A1B0GTI1 187 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 RIIAD1A6NNX1 92 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 PRR32B1ATL7 298 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 H3BNX3 289 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 M0R129 80 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 FXYD1O00168 92 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 PRODHO43272 600 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 IGLV2-23P01705 113 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 ZNF3P17036 446 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 ADMP35318 185 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 ZNF137PP52743 207 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 KRTAP10-1P60331 282 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 TAGLNQ01995 201 aaKnown RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 PJVKQ0ZLH3 352 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 PDZK1IP1Q13113 114 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 CYLC2Q14093 348 aaPredicted RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 RNF212Q495C1 297 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 BCL2L15Q5TBC7 163 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 ERICH5Q6P6B1 374 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 OR10A7Q8NGE5 316 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 OR13C5Q8NGS8 318 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 FAM46BQ96A09 425 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 USMG5Q96IX5 58 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 C6orf62Q9GZU0 229 aaPredicted RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 LGALS13Q9UHV8 139 aa2.32□□□□□ -2.04
CHD1-211ENST00000514344 RPL36Q9Y3U8 105 aaKnown RBP2.32□□□□□ -2.04
CHD1-211ENST00000514344 IGKV1-9A0A0C4DH69 117 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 A0A1B0GW64 132 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ACOD1A6NK06 481 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 FAM90A23PA8MXZ1 464 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 C15orf65H3BRN8 121 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 H3BUA1 57 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 LANCL1O43813 399 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 GATBO75879 557 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 SERPINA3P01011 423 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 T-ENOLP0DO92 83 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ALOX5APP20292 161 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 GZMHP20718 246 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 RRM2P31350 389 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 TFPI2P48307 235 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ELLP55199 621 aaPredicted RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 RPS27AP62979 156 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 LIPEQ05469 1076 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 RIPK1Q13546 671 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ZNF829Q3KNS6 432 aaPredicted RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 SAMD4BQ5PRF9 694 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 UNQ9165/PRO28630Q6UXU0 137 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 ADAD2Q8NCV1 583 aaKnown RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 ZNF439Q8NDP4 499 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 BBS1Q8NFJ9 593 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 OR10K1Q8NGX5 313 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 OR10AC1Q8NH08 325 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 PHB2Q99623 299 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 SPAG8Q99932 426 aaPredicted RBP2.31□□□□□ -2.04
CHD1-211ENST00000514344 BTBD10Q9BSF8 475 aa2.31□□□□□ -2.04
CHD1-211ENST00000514344 CHST5Q9GZS9 411 aa2.31□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms