RNA–Protein interactions for RNA: ENST00000512151.5

NUP54-211, Transcript of nucleoporin 54, humanhuman

TSL 2

Gene NUP54, Length 1,385 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP54-211ENST00000512151 SLC25A46Q96AG3 418 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 SPSB1Q96BD6 273 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 BORCS8Q96FH0 119 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 KCTD7Q96MP8 289 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 ST6GALNAC5Q9BVH7 336 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 ABCB9Q9NP78 766 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 TMEM138Q9NPI0 162 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 RASL12Q9NYN1 266 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 OR14J1Q9UGF5 321 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 SLC7A11Q9UPY5 501 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 GSTK1Q9Y2Q3 226 aa7.03□□□□□ -1.28
NUP54-211ENST00000512151 FUOMA2VDF0 154 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 F8VVB4 439 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 F8VWA3 439 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 CDRT1O95170 752 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 ELANEP08246 267 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 OR8U8P0C7N1 319 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 PRKACBP22694 351 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 TNFSF8P32971 234 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 SDC2P34741 201 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 HAAOP46952 286 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 BCAP31P51572 246 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 ATP1B3P54709 279 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 PPP3R1P63098 170 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 MXD1Q05195 221 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 HNF4GQ14541 408 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 LINC01559Q495D7 138 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 SPANXN2Q5MJ10 180 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 PRAMEF5Q5TYX0 476 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 ZNF554Q86TJ5 538 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 SGPP2Q8IWX5 399 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 DRAXINQ8NBI3 349 aaPredicted RBP7.02□□□□□ -1.29
NUP54-211ENST00000512151 OR4D6Q8NGJ1 314 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 ZNF671Q8TAW3 534 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 MYOZ3Q8TDC0 251 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 OR5B12Q96R08 314 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 CCDC32Q9BV29 185 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 MTCH1Q9NZJ7 389 aa7.02□□□□□ -1.29
NUP54-211ENST00000512151 HSPG2P98160 4391 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 TMEM82A0PJX8 343 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 LEUTXA8MZ59 168 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 J3QT63 122 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 CTDSP2O14595 271 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 CALCBP10092 127 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 SLC2A2P11168 524 aaPredicted RBP7.01□□□□□ -1.29
NUP54-211ENST00000512151 ARSBP15848 533 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 RAB3BP20337 219 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 MYL9P24844 172 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 MPZP25189 248 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 ZNF93P35789 620 aaPredicted RBP7.01□□□□□ -1.29
NUP54-211ENST00000512151 GPR12P47775 334 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 NPBWR2P48146 333 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 PSMD7P51665 324 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 SLURP1P55000 103 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 ZNF616Q08AN1 781 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 PDZK1IP1Q13113 114 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 C1orf100Q5SVJ3 147 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 STEAP3Q658P3 488 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 SLC25A26Q70HW3 274 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 ZNF573Q86YE8 665 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 THNSL2Q86YJ6 484 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 SNX29P2Q8IUI4 249 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 FOXRED2Q8IWF2 684 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 ASCC1Q8N9N2 400 aaKnown RBP7.01□□□□□ -1.29
NUP54-211ENST00000512151 OR56B4Q8NH76 319 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 ARPC1AQ92747 370 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 SLAMF9Q96A28 289 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 CEP19Q96LK0 163 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 SDHCQ99643 169 aaPredicted RBP7.01□□□□□ -1.29
NUP54-211ENST00000512151 PKIBQ9C010 78 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 KCNK15Q9H427 330 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 ZNF286AQ9HBT8 521 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 CKLFQ9UBR5 152 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 V9GY05 133 aa7.01□□□□□ -1.29
NUP54-211ENST00000512151 A0A0B4J203 849 aa7□□□□□ -1.29
NUP54-211ENST00000512151 A0A1B0GVY2 172 aa7□□□□□ -1.29
NUP54-211ENST00000512151 A0A1W2PP11 408 aa7□□□□□ -1.29
NUP54-211ENST00000512151 C12orf77C9JDV5 145 aa7□□□□□ -1.29
NUP54-211ENST00000512151 BUB1B-PAK6H3BSN5 160 aa7□□□□□ -1.29
NUP54-211ENST00000512151 AP4M1O00189 453 aa7□□□□□ -1.29
NUP54-211ENST00000512151 FGF16O43320 207 aa7□□□□□ -1.29
NUP54-211ENST00000512151 PTTG1O95997 202 aa7□□□□□ -1.29
NUP54-211ENST00000512151 IGHG4P01861 327 aa7□□□□□ -1.29
NUP54-211ENST00000512151 FAM106CPP0CH98 169 aa7□□□□□ -1.29
NUP54-211ENST00000512151 TMEM11P17152 192 aa7□□□□□ -1.29
NUP54-211ENST00000512151 BCL3P20749 454 aa7□□□□□ -1.29
NUP54-211ENST00000512151 PSMB8P28062 276 aa7□□□□□ -1.29
NUP54-211ENST00000512151 PTGFRP43088 359 aa7□□□□□ -1.29
NUP54-211ENST00000512151 CLDN12P56749 244 aa7□□□□□ -1.29
NUP54-211ENST00000512151 ERVK11-1P61568 191 aa7□□□□□ -1.29
NUP54-211ENST00000512151 IL24Q13007 206 aa7□□□□□ -1.29
NUP54-211ENST00000512151 PLA2G7Q13093 441 aa7□□□□□ -1.29
NUP54-211ENST00000512151 PMS2P11Q13670 270 aa7□□□□□ -1.29
NUP54-211ENST00000512151 EDDM3AQ14507 147 aa7□□□□□ -1.29
NUP54-211ENST00000512151 HLA-DRB5Q30154 266 aa7□□□□□ -1.29
NUP54-211ENST00000512151 HES5Q5TA89 166 aa7□□□□□ -1.29
NUP54-211ENST00000512151 GLT8D1Q68CQ7 371 aa7□□□□□ -1.29
NUP54-211ENST00000512151 ACSM6Q6P461 480 aa7□□□□□ -1.29
NUP54-211ENST00000512151 ASCL4Q6XD76 172 aa7□□□□□ -1.29
NUP54-211ENST00000512151 TPRA1Q86W33 373 aa7□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms