RNA–Protein interactions for RNA: ENST00000511001.2

CHFR-208, Transcript of checkpoint with forkhead and ring finger domains, humanhuman

TSL 5

Gene CHFR, Length 892 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHFR-208ENST00000511001 RAB9BQ9NP90 201 aa9.51□□□□□ -0.89
CHFR-208ENST00000511001 LINC00527Q9UJ94 153 aa9.51□□□□□ -0.89
CHFR-208ENST00000511001 PF4V1P10720 104 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 CPEP16870 476 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 MAP2K4P45985 399 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 MLLT11Q13015 90 aaPredicted RBP9.5□□□□□ -0.89
CHFR-208ENST00000511001 STEAP3Q658P3 488 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 ZNF880Q6PDB4 577 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 ETV3LQ6ZN32 361 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 C18orf65Q6ZTR6 163 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 PRSS48Q7RTY5 328 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 SLC35E3Q7Z769 313 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 TGIF2LXQ8IUE1 241 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 KCNG3Q8TAE7 436 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 RAB2BQ8WUD1 216 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 PHF21AQ96BD5 680 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 FAAP24Q9BTP7 215 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 LPAR5Q9H1C0 372 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 ABCG5Q9H222 651 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 OR2S2Q9NQN1 319 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 JPT1Q9UK76 154 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 NBEAL2Q6ZNJ1 2754 aa9.5□□□□□ -0.89
CHFR-208ENST00000511001 FOXI3A8MTJ6 420 aaPredicted RBP9.49□□□□□ -0.89
CHFR-208ENST00000511001 SERPINE3A8MV23 424 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 SLC17A2O00624 439 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 TXNL1O43396 289 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 LANCL1O43813 399 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 YPEL1O60688 119 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 BPNT1O95861 308 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 NAPSAO96009 420 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 MOSP00540 346 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 HSMCR30P0CW71 290 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 IGLL1P15814 213 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 CD33P20138 364 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 PPP1CCP36873 323 aaKnown RBP9.49□□□□□ -0.89
CHFR-208ENST00000511001 GPR12P47775 334 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 F2RL1P55085 397 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 RPL23AP62750 156 aaKnown RBP9.49□□□□□ -0.89
CHFR-208ENST00000511001 HTD2P86397 168 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 KHDC1LQ5JSQ8 128 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 LY6G6FQ5SQ64 297 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 CLVS1Q8IUQ0 354 aaPredicted RBP9.49□□□□□ -0.89
CHFR-208ENST00000511001 STPG2Q8N412 459 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 SVOPQ8N4V2 548 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 OR6M1Q8NGM8 313 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 CHPT1Q8WUD6 406 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 NEDD4LQ96PU5 975 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 YPEL2Q96QA6 119 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 ABHD14AQ9BUJ0 271 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 CCDC90BQ9GZT6 254 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 LIN7CQ9NUP9 197 aaKnown RBP9.49□□□□□ -0.89
CHFR-208ENST00000511001 KCNIP1Q9NZI2 227 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 AK6Q9Y3D8 172 aaKnown RBP9.49□□□□□ -0.89
CHFR-208ENST00000511001 RYR3Q15413 4870 aa9.49□□□□□ -0.89
CHFR-208ENST00000511001 NCBP2LA6PVI3 153 aaKnown RBP9.48□□□□□ -0.89
CHFR-208ENST00000511001 H3BMQ9 156 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 SOCS1O15524 211 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 PF4P02776 101 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 BLVRBP30043 206 aaPredicted RBP9.48□□□□□ -0.89
CHFR-208ENST00000511001 FABP5Q01469 135 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 P2RY14Q15391 338 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 TRAM1Q15629 374 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 OR2W3Q7Z3T1 314 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 FAM89BQ8N5H3 189 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 FAM71E2Q8N5Q1 922 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 DRAXINQ8NBI3 349 aaPredicted RBP9.48□□□□□ -0.89
CHFR-208ENST00000511001 S1PR3Q99500 378 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 MGLLQ99685 303 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 NABP2Q9BQ15 211 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 HSPB9Q9BQS6 159 aa9.48□□□□□ -0.89
CHFR-208ENST00000511001 PSMA1P25786 263 aaKnown RBP9.47□□□□□ -0.89
CHFR-208ENST00000511001 TMEM50BP56557 158 aa9.47□□□□□ -0.89
CHFR-208ENST00000511001 TBCEQ15813 527 aaPredicted RBP9.47□□□□□ -0.89
CHFR-208ENST00000511001 SSX1Q16384 188 aa9.47□□□□□ -0.89
CHFR-208ENST00000511001 ZNF833PQ6ZTB9 187 aa9.47□□□□□ -0.89
CHFR-208ENST00000511001 REC114Q7Z4M0 266 aa9.47□□□□□ -0.89
CHFR-208ENST00000511001 FOXRED2Q8IWF2 684 aa9.47□□□□□ -0.89
CHFR-208ENST00000511001 LINC00482Q8N8I6 264 aa9.47□□□□□ -0.89
CHFR-208ENST00000511001 BORCS5Q969J3 196 aa9.47□□□□□ -0.89
CHFR-208ENST00000511001 HDHD3Q9BSH5 251 aaPredicted RBP9.47□□□□□ -0.89
CHFR-208ENST00000511001 MRPL20Q9BYC9 149 aaKnown RBP9.47□□□□□ -0.89
CHFR-208ENST00000511001 PARP12Q9H0J9 701 aaKnown RBP9.47□□□□□ -0.89
CHFR-208ENST00000511001 NECAP2Q9NVZ3 263 aa9.47□□□□□ -0.89
CHFR-208ENST00000511001 AURKAIP1Q9NWT8 199 aaPredicted RBP9.47□□□□□ -0.89
CHFR-208ENST00000511001 TRBV6-6A0A0A6YYG2 114 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 SHISA3A0PJX4 238 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 AP4M1O00189 453 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 LDLRAD4O15165 306 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 ARL6IP5O75915 188 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 OR3A3P47888 321 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 THBS3P49746 956 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 CLDN12P56749 244 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 SLC35B1P78383 322 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 CFHR3Q02985 330 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 PLA2G7Q13093 441 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 C8orf86Q6ZUL3 223 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 MRPL41Q8IXM3 137 aaKnown RBP9.46□□□□□ -0.9
CHFR-208ENST00000511001 COMMD1Q8N668 190 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 OR51D1Q8NGF3 324 aa9.46□□□□□ -0.9
CHFR-208ENST00000511001 OR8H1Q8NGG4 311 aa9.46□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms