RNA–Protein interactions for RNA: ENST00000509357.5

PDLIM5-213, Transcript of PDZ and LIM domain 5, humanhuman

TSL 5

Gene PDLIM5, Length 554 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-213ENST00000509357 ABRACLQ9P1F3 81 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 OR1A1Q9P1Q5 309 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 COMMD3Q9UBI1 195 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 PSG11Q9UQ72 335 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 AMMECR1Q9Y4X0 333 aaPredicted RBP7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 ETV7Q9Y603 341 aa7.02□□□□□ -1.29
PDLIM5-213ENST00000509357 MEIS3P1A6NDR6 274 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 BUB1B-PAK6H3BSN5 160 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 ORC5O43913 435 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 PROP1O75360 226 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 FCER2P06734 321 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 CSF1P09603 554 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 GZMHP20718 246 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 GNG10P50151 68 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 DYNLT3P51808 116 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 SCAND1P57086 179 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 HABP2Q14520 560 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 HLA-DRB5Q30154 266 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 TPTE2P1Q5T6R2 138 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 CCDC144NLQ6NUI1 221 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 CCBE1Q6UXH8 406 aaPredicted RBP7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 PRR18Q8N4B5 295 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 OR10X1Q8NGY0 326 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 OR9G1Q8NH87 305 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 SNAPC3Q92966 411 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 RPEQ96AT9 228 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 CMSS1Q9BQ75 279 aaKnown RBP7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 GFOD1Q9NXC2 390 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 TRAPPC2LQ9UL33 140 aa7.01□□□□□ -1.29
PDLIM5-213ENST00000509357 TRAV18A0A075B6X5 111 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 GSTT2P0CG29 244 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 GSTT2BP0CG30 244 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 FAM106CPP0CH98 169 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 PPP1CCP36873 323 aaKnown RBP7□□□□□ -1.29
PDLIM5-213ENST00000509357 VDAC2P45880 294 aaPredicted RBP7□□□□□ -1.29
PDLIM5-213ENST00000509357 RORCP51449 518 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 LINC00205P59089 165 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 TAS2R20P59543 309 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 BLCAPP62952 87 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 HLA-DRB3P79483 266 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 IGSF11Q5DX21 431 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 CT45A1Q5HYN5 189 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 C9orf152Q5JTZ5 239 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 UBE2NLQ5JXB2 153 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 HACD4Q5VWC8 232 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 CT45A3Q8NHU0 189 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 TOMM40LQ969M1 308 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 KCTD12Q96CX2 325 aaKnown RBP7□□□□□ -1.29
PDLIM5-213ENST00000509357 BCL7BQ9BQE9 202 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 DCUN1D5Q9BTE7 237 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 MMP28Q9H239 520 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 AUNIPQ9H7T9 357 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 ZNF702PQ9H963 129 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 C12orf4Q9NQ89 552 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 CCDC59Q9P031 241 aaKnown RBP7□□□□□ -1.29
PDLIM5-213ENST00000509357 ANAPC10Q9UM13 185 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 PKD1L1Q8TDX9 2849 aa7□□□□□ -1.29
PDLIM5-213ENST00000509357 A0A1W2PPI3 338 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 A6NHS1 94 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 OOSP1A8MZH6 123 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 J3QR06 171 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 SDCBPO00560 298 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 SPINT2O43291 252 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 XRCC3O43542 346 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 FBXO24O75426 580 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 CA11O75493 328 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 TSPAN15O95858 294 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 DEFA6Q01524 100 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 HES1Q14469 280 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 NSUN5P1Q3KNT7 163 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 MORN2Q502X0 79 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 HIST2H2BDQ6DRA6 164 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 C16orf82Q7Z2V1 217 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 CENPVQ7Z7K6 275 aaPredicted RBP6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 CROCCP3Q8IVE0 287 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 LYG1Q8N1E2 194 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 OR10A7Q8NGE5 316 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 SETD6Q8TBK2 473 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 CFHR4Q92496 578 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 ST6GALNAC6Q969X2 333 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 ABHD1Q96SE0 405 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 SOSTQ9BQB4 213 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 ZNF251Q9BRH9 671 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 SLC25A33Q9BSK2 321 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 CABLES2Q9BTV7 478 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 IFI27L2Q9H2X8 130 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 RAB9BQ9NP90 201 aa6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 RSL24D1Q9UHA3 163 aaKnown RBP6.99□□□□□ -1.29
PDLIM5-213ENST00000509357 METTL21EPA6NDL7 271 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 SERPINE3A8MV23 424 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 ZNF736B4DX44 427 aaPredicted RBP6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 TMEM127O75204 238 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 OR2F2O95006 317 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 APOA1P02647 267 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 GSTP1P09211 210 aaKnown RBP6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 HNF4GQ14541 408 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 ABCA11PQ4W5N1 156 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 C6orf183Q5T699 404 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 Q6ZS49 121 aa6.98□□□□□ -1.29
PDLIM5-213ENST00000509357 SLC25A48Q6ZT89 311 aaKnown RBP6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 31.1 ms