RNA–Protein interactions for RNA: ENST00000508974.5

UBE2D3-228, Transcript of ubiquitin conjugating enzyme E2 D3, humanhuman

TSL 4

Gene UBE2D3, Length 568 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBE2D3-228ENST00000508974 FOXRED2Q8IWF2 684 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 SVOPQ8N4V2 548 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 OR51D1Q8NGF3 324 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 CHPT1Q8WUD6 406 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 PHF21AQ96BD5 680 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 GALMQ96C23 342 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 RASL11BQ9BPW5 248 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 MRPL20Q9BYC9 149 aaKnown RBP11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 ISYNA1Q9NPH2 558 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 ABRACLQ9P1F3 81 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 AK3Q9UIJ7 227 aa11.69□□□□□ -0.54
UBE2D3-228ENST00000508974 NOTCH3Q9UM47 2321 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 NUDT19A8MXV4 375 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 ST8SIA5O15466 376 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 ATP6V1G2O95670 118 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 PSMA1P25786 263 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 VEGFCP49767 419 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 ZNF137PP52743 207 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 HTD2P86397 168 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 PLA2G7Q13093 441 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 LSAMPQ13449 338 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 LCNL1Q6ZST4 164 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 ZNF554Q86TJ5 538 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 ODF3L1Q8IXM7 274 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 STPG2Q8N412 459 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 OR2AK2Q8NG84 335 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 S1PR3Q99500 378 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 HSPB9Q9BQS6 159 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 URM1Q9BTM9 101 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 ABCG5Q9H222 651 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 PLSCR3Q9NRY6 295 aa11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 LIN7CQ9NUP9 197 aaKnown RBP11.68□□□□□ -0.54
UBE2D3-228ENST00000508974 SAA2-SAA4A0A096LPE2 208 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 LANCL1O43813 399 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 YPEL1O60688 119 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 RGS11O94810 467 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 NAPSAO96009 420 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 SAA2P0DJI9 122 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 CD37P11049 281 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 CNTFRP26992 372 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 RPL23AP62750 156 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 SLC35B1P78383 322 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 PRR20EP86478 221 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 PRR20CP86479 221 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 PRR20DP86480 221 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 PRR20BP86481 221 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 PRR20AP86496 221 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 MMDQ15546 238 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 TBCEQ15813 527 aaPredicted RBP11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 SSX1Q16384 188 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 C8orf86Q6ZUL3 223 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 ZNF367Q7RTV3 350 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 OR2W3Q7Z3T1 314 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 KLHL30-AS1Q8NEE0 82 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 YPEL2Q96QA6 119 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 PARP12Q9H0J9 701 aaKnown RBP11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 ACOT13Q9NPJ3 140 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 STEAP1Q9UHE8 339 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 BLOC1S6Q9UL45 172 aa11.67□□□□□ -0.54
UBE2D3-228ENST00000508974 AP4M1O00189 453 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 OR10A3P58181 314 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 FOXB2Q5VYV0 432 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 STEAP3Q658P3 488 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 FAM71E2Q8N5Q1 922 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 FAM3DQ96BQ1 224 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 ARHGAP5-AS1Q96IT6 56 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 RITA1Q96K30 269 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 DUX3Q96PT4 197 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 NABP2Q9BQ15 211 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 OR1A1Q9P1Q5 309 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 SLC23A1Q9UHI7 598 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 RAB26Q9ULW5 256 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 V9GY05 133 aa11.66□□□□□ -0.54
UBE2D3-228ENST00000508974 SMIM30A4D0T7 59 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 DENRO43583 198 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 RPLP1P05386 114 aaKnown RBP11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 SOX6P35712 828 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 ACTBP60709 375 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 C2orf76Q3KRA6 126 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 RPL39P5Q59GN2 51 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 ZNF880Q6PDB4 577 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 ETV3LQ6ZN32 361 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 ZNF833PQ6ZTB9 187 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 MRAPQ8TCY5 172 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 ABHD14BQ96IU4 210 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 PECRQ9BY49 303 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 IFI27L2Q9H2X8 130 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 NECAP2Q9NVZ3 263 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 AURKAIP1Q9NWT8 199 aaPredicted RBP11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 LRRC42Q9Y546 428 aa11.65□□□□□ -0.54
UBE2D3-228ENST00000508974 TMEM272A0A1B0GTI8 110 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 SHISA3A0PJX4 238 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 FOXI3A8MTJ6 420 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 HSPA12AO43301 675 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 RRP9O43818 475 aaKnown RBP11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 TMEM50BP56557 158 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 HLA-DRB3P79483 266 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 FAM131AQ6UXB0 335 aa11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 GLDNQ6ZMI3 551 aaPredicted RBP11.64□□□□□ -0.55
UBE2D3-228ENST00000508974 MOB1BQ7L9L4 216 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 32.4 ms