RNA–Protein interactions for RNA: ENST00000508216.5

PDLIM5-210, Transcript of PDZ and LIM domain 5, humanhuman

TSL 2 BASIC

Gene PDLIM5, Length 1,794 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM5-210ENST00000508216 FEZF1A0PJY2 475 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 E9PLN8 166 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 CRXO43186 299 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ERI3O43414 337 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 HLA-DQA2P01906 255 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 TTRP02766 147 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 MT-ND6P03923 174 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 CELA3BP08861 270 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 OR9G9P0C7N8 305 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 HIST1H1DP16402 221 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ACP1P24666 158 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 TIA1P31483 386 aaKnown RBP eCLIP9.24□□□□□ -0.934e-7■■■■■ 27.1
PDLIM5-210ENST00000508216 CCKBRP32239 447 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 RPL8P62917 257 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 OR8B8Q15620 311 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF385BQ569K4 471 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ACSM6Q6P461 480 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 RFLNAQ6ZTI6 216 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 PIP4P1Q86T03 277 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF761Q86XN6 746 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 GCSAMQ8N6F7 178 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 Q8TCH9 128 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 OR5P3Q8WZ94 311 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 EMG1Q92979 244 aaKnown RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 ABHD14BQ96IU4 210 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 AKIRIN1Q9H9L7 192 aaPredicted RBP9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 KLHL13Q9P2N7 655 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 CD207Q9UJ71 328 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 SPCS1Q9Y6A9 102 aa9.24□□□□□ -0.93
PDLIM5-210ENST00000508216 CASP8AP2Q9UKL3 1982 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 KMT2EQ8IZD2 1858 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 CCL22O00626 93 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 CDC42EP2O14613 210 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 SYNGR1O43759 233 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 CER1O95813 267 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 CA2P00918 260 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 ZGLP1P0C6A0 271 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 VSIG8P0DPA2 414 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 IL9P15248 144 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 SFTPDP35247 375 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 CFHR2P36980 270 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 CLDN6P56747 220 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 MFGE8Q08431 387 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 PSG5Q15238 335 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 EFNB3Q15768 340 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF436-AS1Q8NC38 126 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 VSTM2LQ96N03 204 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 OXGR1Q96P68 337 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 ATP5SQ99766 215 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 C19orf24Q9BVV8 132 aa9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 FNDC4Q9H6D8 234 aaPredicted RBP9.23□□□□□ -0.93
PDLIM5-210ENST00000508216 A0A0G2JLM5 398 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 RIIAD1A6NNX1 92 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 C21orf140B9A014 251 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 CLDN5O00501 218 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 TMPRSS2O15393 492 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 CELA2AP08217 269 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 VDAC1P21796 283 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 TNXAQ16473 311 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 SGCBQ16585 318 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF766Q5HY98 468 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 ADGRE4PQ86SQ3 457 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 LRTM2Q8N967 370 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 FADS6Q8N9I5 356 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 OR8B3Q8NGG8 313 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 OR10D3Q8NH80 312 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 BORCS7Q96B45 105 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 MSI2Q96DH6 328 aaKnown RBP9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF837Q96EG3 531 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 OR8B2Q96RD0 313 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 C11orf1Q9H5F2 150 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 BPTFQ12830 3046 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 SMCHD1A6NHR9 2005 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 A0A1W2PNR3 127 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 PLPP3O14495 311 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 RER1O15258 196 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 XRCC2O43543 280 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 NHLRC4P0CG21 123 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 IGFBP2P18065 325 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 SRD5A1P18405 259 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 HIST1H1TP22492 207 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 PLP2Q04941 152 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 ZIC1Q15915 447 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 DHRS13Q6UX07 377 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 ZFP62Q8NB50 900 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 C10orf35Q96D05 121 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 PERPQ96FX8 193 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 SPAG8Q99932 426 aaPredicted RBP9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 WFDC6Q9BQY6 131 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 ZNF257Q9Y2Q1 563 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 POLR1DQ9Y2S0 133 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 HS3ST4Q9Y661 456 aa9.22□□□□□ -0.93
PDLIM5-210ENST00000508216 A0A1W2PS18 150 aa9.21□□□□□ -0.94
PDLIM5-210ENST00000508216 MBLAC1A4D2B0 266 aaPredicted RBP9.21□□□□□ -0.94
PDLIM5-210ENST00000508216 LRRC3CA6NJW4 275 aa9.21□□□□□ -0.94
PDLIM5-210ENST00000508216 GLOD5A6NK44 160 aa9.21□□□□□ -0.94
PDLIM5-210ENST00000508216 UPK3AO75631 287 aa9.21□□□□□ -0.94
PDLIM5-210ENST00000508216 EPPINO95925 133 aa9.21□□□□□ -0.94
PDLIM5-210ENST00000508216 CT45A10P0DMU9 189 aa9.21□□□□□ -0.94
PDLIM5-210ENST00000508216 FABP2P12104 132 aa9.21□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms