RNA–Protein interactions for RNA: ENST00000507597.5

USP53-203, Transcript of ubiquitin specific peptidase 53, humanhuman

TSL 3

Gene USP53, Length 503 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-203ENST00000507597 IGLV1-47P01700 117 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 CSF1P09603 554 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 SAA4P35542 130 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 CDK10Q15131 360 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 BRD3OSQ6XYD6 125 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 Q6ZPA2 131 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 SLC25A48Q6ZT89 311 aaKnown RBP16.34■□□□□ 0.21
USP53-203ENST00000507597 OR52I2Q8NH67 350 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 ZNF418Q8TF45 676 aaPredicted RBP16.34■□□□□ 0.21
USP53-203ENST00000507597 ABHD14AQ9BUJ0 271 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 PIPOXQ9P0Z9 390 aa16.34■□□□□ 0.21
USP53-203ENST00000507597 BUB1B-PAK6H3BSN5 160 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 SLC22A5O76082 557 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 PPP1CCP36873 323 aaKnown RBP16.33■□□□□ 0.2
USP53-203ENST00000507597 DLX1P56177 255 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 AP3S2P59780 193 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 IGSF11Q5DX21 431 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 TMEM17Q86X19 198 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 GDPD1Q8N9F7 314 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 GCDHQ92947 438 aaPredicted RBP16.33■□□□□ 0.2
USP53-203ENST00000507597 RPEQ96AT9 228 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 JMJD8Q96S16 334 aa16.33■□□□□ 0.2
USP53-203ENST00000507597 ZNF736B4DX44 427 aaPredicted RBP16.32■□□□□ 0.2
USP53-203ENST00000507597 IFNA6P05013 189 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 OR5H8P0DN80 308 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 INPP1P49441 399 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 TAS2R19P59542 299 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 PRB3Q04118 309 aaPredicted RBP16.32■□□□□ 0.2
USP53-203ENST00000507597 RUSC1-AS1Q66K80 236 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 Q8N402 240 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 TMEM229BQ8NBD8 167 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 OR4P4Q8NGL7 312 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 LEAP2Q969E1 77 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 S1PR3Q99500 378 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 OCEL1Q9H607 264 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 RDH8Q9NYR8 311 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 ZNF221Q9UK13 617 aa16.32■□□□□ 0.2
USP53-203ENST00000507597 A0A0A6YYJ9 748 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 RAB29O14966 203 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 TXNL1O43396 289 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 IGHV3-7P01780 117 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 TSPAN5P62079 268 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 RNASE12Q5GAN4 147 aaKnown RBP16.31■□□□□ 0.2
USP53-203ENST00000507597 PIP4P2Q8N4L2 257 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 SNAPC3Q92966 411 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 BORCS5Q969J3 196 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 THAP7Q9BT49 309 aaPredicted RBP16.31■□□□□ 0.2
USP53-203ENST00000507597 ABCB10Q9NRK6 738 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 EHFQ9NZC4 300 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 OR1A1Q9P1Q5 309 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 KLK11Q9UBX7 282 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 V9GYH0 126 aa16.31■□□□□ 0.2
USP53-203ENST00000507597 IGKV1D-8A0A087WSZ0 117 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 IGKV1-6A0A0C4DH72 117 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 BTBD17A6NE02 478 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 GAPDHP04406 335 aaKnown RBP16.3■□□□□ 0.2
USP53-203ENST00000507597 HLA-DMAP28067 261 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 BRS3P32247 399 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 FAUP35544 74 aaKnown RBP16.3■□□□□ 0.2
USP53-203ENST00000507597 LUMP51884 338 aaPredicted RBP16.3■□□□□ 0.2
USP53-203ENST00000507597 DGCR2P98153 550 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 GNMTQ14749 295 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 HERPUD1Q15011 391 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 AANATQ16613 207 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 PLA1AQ53H76 456 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 RNASE10Q5GAN6 216 aaKnown RBP16.3■□□□□ 0.2
USP53-203ENST00000507597 CT45A1Q5HYN5 189 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 H1FOOQ8IZA3 346 aaPredicted RBP16.3■□□□□ 0.2
USP53-203ENST00000507597 LYG1Q8N1E2 194 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 ZNF439Q8NDP4 499 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 OR6F1Q8NGZ6 308 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 CT45A3Q8NHU0 189 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 GIMAP1Q8WWP7 306 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 DEDD2Q8WXF8 326 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 TOMM40LQ969M1 308 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 MEGF9Q9H1U4 602 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 DPAGT1Q9H3H5 408 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 OR2W1Q9Y3N9 320 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 TLN2Q9Y4G6 2542 aa16.3■□□□□ 0.2
USP53-203ENST00000507597 A0A0U1RQK1 487 aa16.29■□□□□ 0.2
USP53-203ENST00000507597 FCER2P06734 321 aa16.29■□□□□ 0.2
USP53-203ENST00000507597 DYRK1AQ13627 763 aa16.29■□□□□ 0.2
USP53-203ENST00000507597 MEF2DQ14814 521 aa16.29■□□□□ 0.2
USP53-203ENST00000507597 FAM71F2Q6NXP2 309 aa16.29■□□□□ 0.2
USP53-203ENST00000507597 OVCH2Q7RTZ1 564 aa16.29■□□□□ 0.2
USP53-203ENST00000507597 OR8H3Q8N146 312 aa16.29■□□□□ 0.2
USP53-203ENST00000507597 C22orf15Q8WYQ4 148 aa16.29■□□□□ 0.2
USP53-203ENST00000507597 WDR12Q9GZL7 423 aaKnown RBP16.29■□□□□ 0.2
USP53-203ENST00000507597 C11orf54Q9H0W9 315 aaPredicted RBP16.29■□□□□ 0.2
USP53-203ENST00000507597 A0A1W2PPE3 182 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 PMP2P02689 132 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 AKAIN1P0CW23 69 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 FCGR2CP31995 323 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 HRH1P35367 487 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 GPR12P47775 334 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 HERV-K104P61576 105 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 SSX2Q16385 188 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 DEFB112Q30KQ8 113 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 VAX1Q5SQQ9 334 aa16.28■□□□□ 0.2
USP53-203ENST00000507597 TPTE2P1Q5T6R2 138 aa16.28■□□□□ 0.2
Retrieved 100 of 20,778 RNA–protein pairs in 30.1 ms