RNA–Protein interactions for RNA: ENST00000506409.1

MED28-204, Transcript of mediator complex subunit 28, humanhuman

TSL 2

Gene MED28, Length 347 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MED28-204ENST00000506409 YPEL2Q96QA6 119 aa12.36□□□□□ -0.43
MED28-204ENST00000506409 PECRQ9BY49 303 aa12.36□□□□□ -0.43
MED28-204ENST00000506409 C12orf4Q9NQ89 552 aa12.36□□□□□ -0.43
MED28-204ENST00000506409 TXNL4BQ9NX01 149 aaKnown RBP12.36□□□□□ -0.43
MED28-204ENST00000506409 TRBV6-6A0A0A6YYG2 114 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 FGF16O43320 207 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 CD1BP29016 333 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 FGF9P31371 208 aaPredicted RBP12.35□□□□□ -0.43
MED28-204ENST00000506409 PLA2G7Q13093 441 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 NSUN5P1Q3KNT7 163 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 PLAC9Q5JTB6 97 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 LY6G6FQ5SQ64 297 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 NDUFA11Q86Y39 141 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 OR2AK2Q8NG84 335 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 OR5AU1Q8NGC0 362 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 CITED2Q99967 270 aaPredicted RBP12.35□□□□□ -0.43
MED28-204ENST00000506409 CMSS1Q9BQ75 279 aaKnown RBP12.35□□□□□ -0.43
MED28-204ENST00000506409 MGAT4AQ9UM21 535 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 SSR3Q9UNL2 185 aa12.35□□□□□ -0.43
MED28-204ENST00000506409 A0A0B4J203 849 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 SMIM30A4D0T7 59 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 NCBP2LA6PVI3 153 aaKnown RBP12.34□□□□□ -0.43
MED28-204ENST00000506409 ZNF736B4DX44 427 aaPredicted RBP12.34□□□□□ -0.43
MED28-204ENST00000506409 LANCL1O43813 399 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 MOSP00540 346 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 RAB6AP20340 208 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 HLA-DRB3P79483 266 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 NEDD8Q15843 81 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 NR2C2APQ86WQ0 139 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 Q8N6K4 173 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 RAB3CQ96E17 227 aa12.34□□□□□ -0.43
MED28-204ENST00000506409 GADD45AP24522 165 aa12.33□□□□□ -0.44
MED28-204ENST00000506409 MRPS15P82914 257 aaKnown RBP12.33□□□□□ -0.44
MED28-204ENST00000506409 MOGAT2Q3SYC2 334 aa12.33□□□□□ -0.44
MED28-204ENST00000506409 ODF3L1Q8IXM7 274 aa12.33□□□□□ -0.44
MED28-204ENST00000506409 OR51E2Q9H255 320 aa12.33□□□□□ -0.44
MED28-204ENST00000506409 Q9N2K0 584 aa12.33□□□□□ -0.44
MED28-204ENST00000506409 SLC23A1Q9UHI7 598 aa12.33□□□□□ -0.44
MED28-204ENST00000506409 SAA2-SAA4A0A096LPE2 208 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 METTL21EPA6NDL7 271 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 NOTOA8MTQ0 251 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 ST8SIA5O15466 376 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 CD3GP09693 182 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 SAA2P0DJI9 122 aaPredicted RBP12.32□□□□□ -0.44
MED28-204ENST00000506409 SLC2A2P11168 524 aaPredicted RBP12.32□□□□□ -0.44
MED28-204ENST00000506409 ZBTB25P24278 435 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 CD83Q01151 205 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 LSAMPQ13449 338 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 TPRA1Q86W33 373 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 OR4X2Q8NGF9 303 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 OR8H1Q8NGG4 311 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 OR10R2Q8NGX6 335 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 KCTD7Q96MP8 289 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 CHCHD6Q9BRQ6 235 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 MRPL20Q9BYC9 149 aaKnown RBP12.32□□□□□ -0.44
MED28-204ENST00000506409 IFI27L2Q9H2X8 130 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 KCNK7Q9Y2U2 307 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 MEGF8Q7Z7M0 2845 aa12.32□□□□□ -0.44
MED28-204ENST00000506409 A0A075B6Q4 140 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 ADARB2-AS1A8MUL3 147 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 SERPINE3A8MV23 424 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 RAB27BO00194 218 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 HSPA12AO43301 675 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 OPN1MWP04001 364 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 SCTP09683 121 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 OPN1MW2P0DN77 364 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 OPN1MW3P0DN78 364 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 GNB3P16520 340 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 OR3A3P47888 321 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 TCTEX1D4Q5JR98 221 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 ZNF833PQ6ZTB9 187 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 SLC35E3Q7Z769 313 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 Q8N9W7 124 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 OR4F17Q8NGA8 305 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 PTX4Q96A99 478 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 R3HDM4Q96D70 268 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 RBMXL1Q96E39 390 aaKnown RBP12.31□□□□□ -0.44
MED28-204ENST00000506409 OR4F4Q96R69 305 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 PLSCR3Q9NRY6 295 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
MED28-204ENST00000506409 PIPOXQ9P0Z9 390 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 OR1A1Q9P1Q5 309 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 DAPK2Q9UIK4 370 aa12.31□□□□□ -0.44
MED28-204ENST00000506409 LOC100506127A0A0U1RQW1 187 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 A0A1W2PRX2 142 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 TCRBV4S1A1TA0A5B7 111 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 PSMB11A5LHX3 300 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 TRDCB7Z8K6 153 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 MFNGO00587 321 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 RAB29O14966 203 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 IGHG2P01859 326 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 HIST1H1DP16402 221 aaKnown RBP12.3□□□□□ -0.44
MED28-204ENST00000506409 CD36P16671 472 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 SDC2P34741 201 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 CEACAM6P40199 344 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 SFXN4Q6P4A7 337 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 C10orf99Q6UWK7 81 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 CHPT1Q8WUD6 406 aa12.3□□□□□ -0.44
MED28-204ENST00000506409 EDARADDQ8WWZ3 215 aa12.3□□□□□ -0.44
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms