RNA–Protein interactions for RNA: ENST00000504318.5

PDLIM7-211, Transcript of PDZ and LIM domain 7, humanhuman

TSL 3

Gene PDLIM7, Length 597 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM7-211ENST00000504318 OR10X1Q8NGY0 326 aa11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 AP3S1Q92572 193 aa11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 THRSPQ92748 146 aa11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 EAF1Q96JC9 268 aaPredicted RBP11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 SULT4A1Q9BR01 284 aa11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 TM2D1Q9BX74 207 aa11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 NXF2Q9GZY0 626 aaKnown RBP11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 GHRLQ9UBU3 117 aa11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 TSSC4Q9Y5U2 329 aaPredicted RBP11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 PEX16Q9Y5Y5 336 aa11.05□□□□□ -0.64
PDLIM7-211ENST00000504318 IGHV3-72A0A0B4J1Y9 119 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 FOXI3A8MTJ6 420 aaPredicted RBP11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 TMEM14DPA8MWL7 114 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 H3BUI4 141 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 GAPDHP04406 335 aaKnown RBP11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 MYL9P24844 172 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 S100A5P33763 92 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 DCTN2Q13561 401 aaKnown RBP11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 GNMTQ14749 295 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 TMEM30BQ3MIR4 351 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 ZNF880Q6PDB4 577 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 CENPVQ7Z7K6 275 aaPredicted RBP11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 FAM46BQ96A09 425 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 PHF21AQ96BD5 680 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 NOL4LQ96MY1 436 aaPredicted RBP11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 NICN1Q9BSH3 213 aa11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 WDR12Q9GZL7 423 aaKnown RBP11.04□□□□□ -0.64
PDLIM7-211ENST00000504318 A0A075B6Q4 140 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 A0A1W2PRX2 142 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 UBE2QL1A1L167 161 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 PEX14O75381 377 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 ARL6IP5O75915 188 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 SRMP19623 302 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 HTR2CP28335 458 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 CD1BP29016 333 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 RPS27AP62979 156 aaKnown RBP11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 HNF4GQ14541 408 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 ZNF846Q147U1 533 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 MORN2Q502X0 79 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 ARSJQ5FYB0 599 aaPredicted RBP11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 LY6G6FQ5SQ64 297 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 C6orf183Q5T699 404 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 C18orf65Q6ZTR6 163 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 ZNF554Q86TJ5 538 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 TGIF2LXQ8IUE1 241 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 CROCCP3Q8IVE0 287 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 FAM71E2Q8N5Q1 922 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 OR10V1Q8NGI7 309 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 OR6Q1Q8NGQ2 317 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 NEK7Q8TDX7 302 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 SLC25A46Q96AG3 418 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 RNF167Q9H6Y7 350 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 PLGRKTQ9HBL7 147 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 TAF9BQ9HBM6 251 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 PALMDQ9NP74 551 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 TRAPPC2LQ9UL33 140 aa11.03□□□□□ -0.64
PDLIM7-211ENST00000504318 TCRBV4S1A1TA0A5B7 111 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 MPIG6BO95866 241 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 NAPSAO96009 420 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 UBBP0CG47 229 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 TGFBR1P36897 503 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 CFHR3Q02985 330 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 HES1Q14469 280 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 HMGN3Q15651 99 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 STEAP3Q658P3 488 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 TRAT1Q6PIZ9 186 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 ZNF329Q86UD4 541 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 TPRA1Q86W33 373 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 OR4X2Q8NGF9 303 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 BORCS5Q969J3 196 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 C6orf62Q9GZU0 229 aaPredicted RBP11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 CST11Q9H112 138 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 ABCG5Q9H222 651 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 LINC00527Q9UJ94 153 aa11.02□□□□□ -0.65
PDLIM7-211ENST00000504318 PSMB11A5LHX3 300 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 SPINT2O43291 252 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 LANCL1O43813 399 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 IGLL1P15814 213 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 SDC2P34741 201 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 RPS19P39019 145 aaKnown RBP11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 GPR12P47775 334 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 F2RL1P55085 397 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 RPL23AP62750 156 aaKnown RBP11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 HTD2P86397 168 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 HSD17B12Q53GQ0 312 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 C9orf152Q5JTZ5 239 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 C6orf201Q7Z4U5 140 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 CEACAM19Q7Z692 300 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 MOB3BQ86TA1 216 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 STPG2Q8N412 459 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 FAM89BQ8N5H3 189 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 LINC00482Q8N8I6 264 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 OR52L2PQ8NGH6 319 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 HSPB9Q9BQS6 159 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 LPAR5Q9H1C0 372 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 LIN7CQ9NUP9 197 aaKnown RBP11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 AURKAIP1Q9NWT8 199 aaPredicted RBP11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 GNG12Q9UBI6 72 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 JPT1Q9UK76 154 aa11.01□□□□□ -0.65
PDLIM7-211ENST00000504318 TRBV6-6A0A0A6YYG2 114 aa11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 49.4 ms