RNA–Protein interactions for RNA: ENST00000504289.1

COL1A1-210, Transcript of collagen type I alpha 1 chain, humanhuman

TSL 2

Gene COL1A1, Length 481 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL1A1-210ENST00000504289 PTPRQQ9UMZ3 2332 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 PRR14LQ5THK1 2151 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 IGKV1D-17A0A075B6S4 117 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 ODAMA1E959 279 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 FAM90A9PA6NNJ1 464 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 UMAD1C9J7I0 102 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 C15orf65H3BRN8 121 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 F2RL2O00254 374 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 YPEL1O60688 119 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 MED6O75586 246 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 OR8U9P0C7N5 309 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 CCKARP32238 428 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 RPL23AP62750 156 aaKnown RBP8.2□□□□□ -1.1
COL1A1-210ENST00000504289 TNFAIP6P98066 277 aaPredicted RBP8.2□□□□□ -1.1
COL1A1-210ENST00000504289 EIF4EBP1Q13541 118 aaPredicted RBP8.2□□□□□ -1.1
COL1A1-210ENST00000504289 MSMPQ1L6U9 139 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 FBXL19-AS1Q494R0 122 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 MIDNQ504T8 468 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 FAM74A1Q5RGS3 127 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 LRP11Q86VZ4 500 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 SPAG16Q8N0X2 631 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 OR8U1Q8NH10 309 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 OR1L1Q8NH94 360 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 LYPD6BQ8NI32 183 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 GNPNAT1Q96EK6 184 aaPredicted RBP8.2□□□□□ -1.1
COL1A1-210ENST00000504289 C14orf79Q96F83 325 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 YPEL2Q96QA6 119 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 MRPL37Q9BZE1 423 aaKnown RBP8.2□□□□□ -1.1
COL1A1-210ENST00000504289 HIPK2Q9H2X6 1198 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 LINC00574Q9H8X3 128 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 OR2S2Q9NQN1 319 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 LUZP4Q9P127 313 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 FZR1Q9UM11 496 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 RNF115Q9Y4L5 304 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 MMP24Q9Y5R2 645 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 ARID1AO14497 2285 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 FAM208BQ5VWN6 2430 aa8.2□□□□□ -1.1
COL1A1-210ENST00000504289 CADP27708 2225 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 ATRXP46100 2492 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 LRRC30A6NM36 301 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 ZNF705EA8MWA4 302 aaPredicted RBP8.19□□□□□ -1.1
COL1A1-210ENST00000504289 TOR1AO14656 332 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 RBFOX2O43251 390 aaKnown RBP eCLIP8.19□□□□□ -1.1
COL1A1-210ENST00000504289 KCNAB3O43448 404 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 DFFBO76075 338 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 CRYZL1O95825 349 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 IGHV1-46P01743 117 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 SPP1P10451 314 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 IRF2P14316 349 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 SPINK2P20155 84 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 KIR2DS2P43631 304 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 RAB7AP51149 207 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 F2RL1P55085 397 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 EWSR1Q01844 656 aaKnown RBP eCLIP8.19□□□□□ -1.1
COL1A1-210ENST00000504289 PJVKQ0ZLH3 352 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 KLRB1Q12918 225 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 ZNF585BQ52M93 769 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 TEX36Q5VZQ5 186 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 MOGAT3Q86VF5 341 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 ZGRF1Q86YA3 2104 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 TMEM252Q8N6L7 170 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.19□□□□□ -1.1
COL1A1-210ENST00000504289 OR10A7Q8NGE5 316 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 OR51H1Q8NH63 302 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 ITLN1Q8WWA0 313 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 GPR146Q96CH1 333 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 EGLN1Q9GZT9 426 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 GCM1Q9NP62 436 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 ASF1BQ9NVP2 202 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 KCNS2Q9ULS6 477 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 PPP1R3CQ9UQK1 317 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 FRYQ5TBA9 3013 aa8.19□□□□□ -1.1
COL1A1-210ENST00000504289 CHD3Q12873 2000 aaKnown RBP8.19□□□□□ -1.1
COL1A1-210ENST00000504289 CACNA1DQ01668 2161 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 PLCE1Q9P212 2302 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 CFAP47Q6ZTR5 3102 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 KIAA1324LA8MWY0 1029 aaPredicted RBP8.18□□□□□ -1.1
COL1A1-210ENST00000504289 B8ZZF3 427 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 TNFSF12O43508 249 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 DANCRP0C864 163 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 CGB3P0DN86 165 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 CGB7P0DN87 165 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 SFTPCP11686 197 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 EGR1P18146 543 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 GLIPR1P48060 266 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 CEBPDP49716 269 aaPredicted RBP8.18□□□□□ -1.1
COL1A1-210ENST00000504289 ASCL1P50553 236 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 CAV2P51636 162 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 AKR1C2P52895 323 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 POLR2GP62487 172 aaKnown RBP eCLIP8.18□□□□□ -1.1
COL1A1-210ENST00000504289 SWI5Q1ZZU3 235 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 CXorf66Q5JRM2 361 aaPredicted RBP8.18□□□□□ -1.1
COL1A1-210ENST00000504289 STUMQ69YW2 141 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 DPPA3Q6W0C5 159 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 C5orf24Q7Z6I8 188 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 STX12Q86Y82 276 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 C1orf87Q8N0U7 546 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 PRR18Q8N4B5 295 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 GALNT11Q8NCW6 608 aa8.18□□□□□ -1.1
COL1A1-210ENST00000504289 OR1S2Q8NGQ3 325 aa8.18□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms