RNA–Protein interactions for RNA: ENST00000503923.1

VCAN-205, Transcript of versican, humanhuman

TSL 4

Gene VCAN, Length 498 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCAN-205ENST00000503923 ST6GALNAC5Q9BVH7 336 aa9□□□□□ -0.97
VCAN-205ENST00000503923 SLIRPQ9GZT3 109 aaKnown RBP9□□□□□ -0.97
VCAN-205ENST00000503923 ABCB10Q9NRK6 738 aa9□□□□□ -0.97
VCAN-205ENST00000503923 SLC23A1Q9UHI7 598 aa9□□□□□ -0.97
VCAN-205ENST00000503923 IGKV1-6A0A0C4DH72 117 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 DPPA5A6NC42 116 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 ITGB1BP1O14713 200 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 SLC31A2O15432 143 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 PAX6P26367 422 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 CEACAM6P40199 344 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 DYNLT3P51808 116 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 ZNF134P52741 427 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 SRSF2Q01130 221 aaKnown RBP8.99□□□□□ -0.97
VCAN-205ENST00000503923 KRTAP21-3Q3LHN1 58 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 PLA1AQ53H76 456 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 OR2AK2Q8NG84 335 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 FAM216AQ8WUB2 273 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 EDARADDQ8WWZ3 215 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 TOMM40LQ969M1 308 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 DGCR14Q96DF8 476 aaKnown RBP8.99□□□□□ -0.97
VCAN-205ENST00000503923 CABLES2Q9BTV7 478 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 C6orf62Q9GZU0 229 aaPredicted RBP8.99□□□□□ -0.97
VCAN-205ENST00000503923 TNFRSF19Q9NS68 423 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 OR1A1Q9P1Q5 309 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 EXTL2Q9UBQ6 330 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 VPREB3Q9UKI3 123 aa8.99□□□□□ -0.97
VCAN-205ENST00000503923 MRPS7Q9Y2R9 242 aaKnown RBP8.99□□□□□ -0.97
VCAN-205ENST00000503923 IGKV1D-8A0A087WSZ0 117 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 TRBV6-7A0A0A0MS04 114 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 H3BUX3 64 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 CTDSP2O14595 271 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 HSD17B6O14756 317 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 BET1O15155 118 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 TPPPO94811 219 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 HLA-DQB1P01920 261 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 LPLP06858 475 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 CTXN2P0C2S0 81 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 PTHLHP12272 177 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 BRS3P32247 399 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 PRSS3P35030 304 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 RAB7AP51149 207 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 ZNF137PP52743 207 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 ZNF816Q0VGE8 651 aaPredicted RBP8.98□□□□□ -0.97
VCAN-205ENST00000503923 HERPUD1Q15011 391 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 IGSF11Q5DX21 431 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 C16orf87Q6PH81 154 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 CNIH2Q6PI25 160 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 HOGA1Q86XE5 327 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 LAX1Q8IWV1 398 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 OR8H3Q8N146 312 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 LYG1Q8N1E2 194 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 OR10J5Q8NHC4 309 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 MCFD2Q8NI22 146 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 C15orf40Q8WUR7 153 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 DCUN1D5Q9BTE7 237 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 CHIAQ9BZP6 476 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 NXF2Q9GZY0 626 aaKnown RBP8.98□□□□□ -0.97
VCAN-205ENST00000503923 TOLLIPQ9H0E2 274 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 MIXL1Q9H2W2 232 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 IFT46Q9NQC8 304 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 ANXA10Q9UJ72 324 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 ATRQ13535 2644 aa8.98□□□□□ -0.97
VCAN-205ENST00000503923 ST8SIA5O15466 376 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 GAPDHP04406 335 aaKnown RBP8.97□□□□□ -0.97
VCAN-205ENST00000503923 RPL15P61313 204 aaKnown RBP8.97□□□□□ -0.97
VCAN-205ENST00000503923 SNX29P2Q8IUI4 249 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 GVQW1Q8N7I0 195 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 BEST4Q8NFU0 473 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 PIFOQ8TCI5 191 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 TMEM158Q8WZ71 300 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 ST6GALNAC6Q969X2 333 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 GINS4Q9BRT9 223 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 IFI27L2Q9H2X8 130 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 GHITMQ9H3K2 345 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 SCPEP1Q9HB40 452 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 RDH8Q9NYR8 311 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 PIPOXQ9P0Z9 390 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 A3GALT2U3KPV4 340 aa8.97□□□□□ -0.97
VCAN-205ENST00000503923 A0A1W2PPI3 338 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 MEIS3P1A6NDR6 274 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 SULT1C2O00338 296 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 RAB29O14966 203 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 TXNL1O43396 289 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 LANCL1O43813 399 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 RAB13P51153 203 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 ARPC4P59998 168 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 DIAPH2-AS1Q14236 149 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 LY6EQ16553 131 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 KRTAP24-1Q3LI83 254 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 FAM71F2Q6NXP2 309 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 LIAT1Q6ZQX7 453 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 TGIF2LXQ8IUE1 241 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 ODF3L1Q8IXM7 274 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 GPX8Q8TED1 209 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 RTN4IP1Q8WWV3 396 aaPredicted RBP8.96□□□□□ -0.98
VCAN-205ENST00000503923 GCDHQ92947 438 aaPredicted RBP8.96□□□□□ -0.98
VCAN-205ENST00000503923 DIRAS2Q96HU8 199 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 C11orf54Q9H0W9 315 aaPredicted RBP8.96□□□□□ -0.98
VCAN-205ENST00000503923 MMP27Q9H306 513 aa8.96□□□□□ -0.98
VCAN-205ENST00000503923 RAB18Q9NP72 206 aa8.96□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 45.8 ms