RNA–Protein interactions for RNA: ENST00000502948.1

LSM3P4-201, Transcript of LSM3 homolog, U6 small nuclear RNA and mRNA degradation associated pseudogene 4, humanhuman

BASIC

Gene LSM3P4, Length 309 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSM3P4-201ENST00000502948 WBP4O75554 376 aaKnown RBP4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 LGALS1P09382 135 aaKnown RBP4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 UBBP0CG47 229 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 GP9P14770 177 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 MGMTP16455 207 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 MYL12AP19105 171 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 SOX2P48431 317 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 VEGFCP49767 419 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 RAB25P57735 213 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 MED21Q13503 144 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 DOC2BQ14184 412 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 HMGN3Q15651 99 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 ZIK1Q3SY52 487 aaPredicted RBP4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 SLC22A6Q4U2R8 563 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 XAF1Q6GPH4 301 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 SIGIRRQ6IA17 410 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF880Q6PDB4 577 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 SBSPONQ8IVN8 264 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 OR5AN1Q8NGI8 311 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 MRPL30Q8TCC3 161 aaKnown RBP4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 NEK7Q8TDX7 302 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 CCDC107Q8WV48 283 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 PYDC1Q8WXC3 89 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 GHSRQ92847 366 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 GALMQ96C23 342 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 TMEM68Q96MH6 324 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 RCHY1Q96PM5 261 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 SLC29A1Q99808 456 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF251Q9BRH9 671 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 ANKRD60Q9BZ19 345 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 KLK15Q9H2R5 256 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 RIMS4Q9H426 269 aaPredicted RBP4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 GNB4Q9HAV0 340 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 TAF9BQ9HBM6 251 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 AMBNQ9NP70 447 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 ISYNA1Q9NPH2 558 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 SIGLEC8Q9NYZ4 499 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 KCNIP1Q9NZI2 227 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 ZNF581Q9P0T4 197 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 KIAA1456Q9P272 454 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 NKX1-2Q9UD57 310 aaPredicted RBP4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 MGAT4AQ9UM21 535 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 PEX16Q9Y5Y5 336 aa4.72□□□□□ -1.65
LSM3P4-201ENST00000502948 DNAH1Q9P2D7 4330 aa4.71□□□□□ -1.65
LSM3P4-201ENST00000502948 IGHV3-43A0A0B4J1X8 118 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 LCE6AA0A183 80 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 A0A1W2PP11 408 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 ERICH4A6NGS2 130 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 G3V318 75 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 RAB29O14966 203 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 LDLRAD4O15165 306 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 HSPA12AO43301 675 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 PDCD6O75340 191 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 SPDEFO95238 335 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 BPNT1O95861 308 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 NAPSAO96009 420 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 LALBAP00709 142 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 IGLV1-51P01701 117 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 HSPB1P04792 205 aaKnown RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 TFAP2AP05549 437 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 FRMD6-AS1P0C7T7 363 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 IGHV3-43DP0DP04 118 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 RCC1P18754 421 aaPredicted RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 MAPK3P27361 379 aaPredicted RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 CD40LGP29965 261 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 BLVRBP30043 206 aaPredicted RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 ETV1P50549 477 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 GNB1P62873 340 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 ADARB1P78563 741 aaKnown RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 OR2G6Q5TZ20 316 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 AWAT2Q6E213 333 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 GLIPR1L1Q6UWM5 242 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 ZNF562Q6V9R5 426 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 MOB1BQ7L9L4 216 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 ZNF555Q8NEP9 628 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 OR2AK2Q8NG84 335 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 OR4K15Q8NH41 348 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 OR1L1Q8NH94 360 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 DCUN1D4Q92564 292 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 DLX4Q92988 240 aaPredicted RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 PTX4Q96A99 478 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 TMEM80Q96HE8 168 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 RHOVQ96L33 236 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 DERL3Q96Q80 235 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 AGMATQ9BSE5 352 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 TM2D1Q9BX74 207 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 IFI27L2Q9H2X8 130 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 EDA2RQ9HAV5 297 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 C19orf73Q9NVV2 129 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 SMPD3Q9NY59 655 aaPredicted RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 CNOT2Q9NZN8 540 aaKnown RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 AASSQ9UDR5 926 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 STEAP1Q9UHE8 339 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 GAB2Q9UQC2 676 aa4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 FOXA2Q9Y261 457 aaPredicted RBP4.71□□□□□ -1.66
LSM3P4-201ENST00000502948 TRAV8-7A0A075B6U6 113 aa4.7□□□□□ -1.66
LSM3P4-201ENST00000502948 SAA2-SAA4A0A096LPE2 208 aa4.7□□□□□ -1.66
LSM3P4-201ENST00000502948 EFCAB10A6NFE3 127 aa4.7□□□□□ -1.66
LSM3P4-201ENST00000502948 RRHO14718 337 aa4.7□□□□□ -1.66
LSM3P4-201ENST00000502948 SOX15O60248 233 aa4.7□□□□□ -1.66
Retrieved 100 of 20,778 RNA–protein pairs in 25.3 ms