RNA–Protein interactions for RNA: ENST00000502818.5

CPNE4-202, Transcript of copine 4, humanhuman

TSL 5 BASIC

Gene CPNE4, Length 2,120 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPNE4-202ENST00000502818 RBM14Q96PK6 669 aaKnown RBP6.11□□□□□ -1.43
CPNE4-202ENST00000502818 SLC25A21Q9BQT8 299 aaPredicted RBP6.11□□□□□ -1.43
CPNE4-202ENST00000502818 ZNF286AQ9HBT8 521 aa6.11□□□□□ -1.43
CPNE4-202ENST00000502818 CISD1Q9NZ45 108 aaKnown RBP6.11□□□□□ -1.43
CPNE4-202ENST00000502818 METTL1Q9UBP6 276 aaKnown RBP6.11□□□□□ -1.43
CPNE4-202ENST00000502818 TNFSF18Q9UNG2 199 aa6.11□□□□□ -1.43
CPNE4-202ENST00000502818 WIPI2Q9Y4P8 454 aa6.11□□□□□ -1.43
CPNE4-202ENST00000502818 AKAP6Q13023 2319 aa6.11□□□□□ -1.43
CPNE4-202ENST00000502818 DSCAMO60469 2012 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 C9orf170A2RU37 121 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 C1orf196B1AJZ1 125 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 KNG1P01042 644 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 RPS2P15880 293 aaKnown RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 PRDX2P32119 198 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 GABRA2P47869 451 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 NPBWR1P48145 328 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ARL6IP1Q15041 203 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 PEA15Q15121 130 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 SLC9A3R2Q15599 337 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ACTBL2Q562R1 376 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ZNF880Q6PDB4 577 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 C11orf88Q6PI97 169 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 DHRS11Q6UWP2 260 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 PEG10Q86TG7 708 aaKnown RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 LINC00596Q86U02 117 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 Q8IYB0 196 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ARRDC1Q8N5I2 433 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 C15orf54Q8N8G6 183 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 CASTOR1Q8WTX7 329 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ARL11Q969Q4 196 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 KIRREL1Q96J84 757 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 IL19Q9UHD0 177 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 UTP20O75691 2785 aaKnown RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 CEACAM18A8MTB9 384 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 TRDCB7Z8K6 153 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ZNF737O75373 536 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 CLDN14O95500 239 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 HLA-AP01891 365 aaKnown RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 GYPAP02724 150 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 PGAM2P15259 253 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 VAMP1P23763 118 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 LMO1P25800 156 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 CFHR2P36980 270 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 GATA4P43694 442 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 SELENOVP59797 346 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 RELQ04864 619 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 EDDM3AQ14507 147 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ANKRD55Q3KP44 614 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ZNF672Q499Z4 452 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 SPIN3Q5JUX0 258 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 LY6G6FQ5SQ64 297 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 C11orf87Q6NUJ2 197 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 LPCAT3Q6P1A2 487 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ACOT7LQ6ZUV0 252 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ZNF561Q8N587 486 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ZDHHC22Q8N966 263 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 OR13A1Q8NGR1 328 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 OR1L1Q8NH94 360 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 CCL13Q99616 98 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 VRK1Q99986 396 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 ZNF471Q9BX82 626 aaPredicted RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 KRTAP4-11Q9BYQ6 195 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 NECAP2Q9NVZ3 263 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 RNF115Q9Y4L5 304 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 DMRT1Q9Y5R6 373 aa6.1□□□□□ -1.43
CPNE4-202ENST00000502818 FASNP49327 2511 aaKnown RBP6.1□□□□□ -1.43
CPNE4-202ENST00000502818 DYSFO75923 2080 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 TRBV6-6A0A0A6YYG2 114 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 RNF222A6NCQ9 220 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 FPR2P25090 351 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 APOBEC3AP31941 199 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-202ENST00000502818 SSTR5P35346 364 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 ERVFRD-1P60508 538 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 GNMTQ14749 295 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 SMIM21Q3B7S5 101 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 SP6Q3SY56 376 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 PHLDA2Q53GA4 152 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 BEX5Q5H9J7 111 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 CLEC18BQ6UXF7 455 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 IL34Q6ZMJ4 242 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 GAPTQ8N292 157 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 FAM216BQ8N7L0 139 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 RFESDQ8TAC1 157 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 MRGPRDQ8TDS7 321 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 IL1F10Q8WWZ1 152 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 RBMXL1Q96E39 390 aaKnown RBP6.09□□□□□ -1.43
CPNE4-202ENST00000502818 TMEM204Q9BSN7 226 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 SPACA1Q9HBV2 294 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 MYOZ1Q9NP98 299 aaPredicted RBP6.09□□□□□ -1.43
CPNE4-202ENST00000502818 NGBQ9NPG2 151 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 SMCO4Q9NRQ5 59 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 UQCC1Q9NVA1 299 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 RNF7Q9UBF6 113 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 DNAJB11Q9UBS4 358 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 PPP1R3CQ9UQK1 317 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 USF3Q68DE3 2245 aa6.09□□□□□ -1.43
CPNE4-202ENST00000502818 ARID1AO14497 2285 aa6.09□□□□□ -1.44
CPNE4-202ENST00000502818 TRBV23-1A0A0A0MS06 115 aa6.08□□□□□ -1.44
CPNE4-202ENST00000502818 IGHV3-43A0A0B4J1X8 118 aa6.08□□□□□ -1.44
CPNE4-202ENST00000502818 DBX1A6NMT0 343 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms