RNA–Protein interactions for RNA: ENST00000498466.1

CCDC58-207, Transcript of coiled-coil domain containing 58, humanhuman

TSL 2

Gene CCDC58, Length 683 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC58-207ENST00000498466 ODF3L1Q8IXM7 274 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 SYS1Q8N2H4 156 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 RHOVQ96L33 236 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 FAM110AQ9BQ89 295 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 FBXL15Q9H469 300 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 SPACA1Q9HBV2 294 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 RNF150Q9ULK6 438 aa10.66□□□□□ -0.7
CCDC58-207ENST00000498466 EXOGQ9Y2C4 368 aaKnown RBP10.66□□□□□ -0.7
CCDC58-207ENST00000498466 SNTNA6NMZ2 147 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 CD2P06729 351 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 OR3A3P47888 321 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 GBX2P52951 348 aaPredicted RBP10.65□□□□□ -0.7
CCDC58-207ENST00000498466 PPP3R1P63098 170 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 MRPL28Q13084 256 aaKnown RBP10.65□□□□□ -0.7
CCDC58-207ENST00000498466 MEDAGQ5VYS4 303 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 CD200R1LQ6Q8B3 271 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 UNQ5815/PRO19632Q6UWF5 114 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 PPP1R27Q86WC6 154 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 OR52L2PQ8NGH6 319 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 LGALS12Q96DT0 336 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 MRPS24Q96EL2 167 aaKnown RBP10.65□□□□□ -0.7
CCDC58-207ENST00000498466 FAM103A1Q9BTL3 118 aaKnown RBP10.65□□□□□ -0.7
CCDC58-207ENST00000498466 TAF9BQ9HBM6 251 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 TMEM138Q9NPI0 162 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 CNOT2Q9NZN8 540 aaKnown RBP10.65□□□□□ -0.7
CCDC58-207ENST00000498466 NUBP2Q9Y5Y2 271 aa10.65□□□□□ -0.7
CCDC58-207ENST00000498466 FCN1O00602 326 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 RRHO14718 337 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 SLC25A17O43808 307 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 RGS11O94810 467 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 TRGV3P03979 118 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 EGR2P11161 476 aaPredicted RBP10.64□□□□□ -0.71
CCDC58-207ENST00000498466 ZP3P21754 424 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 PPP1CCP36873 323 aaKnown RBP10.64□□□□□ -0.71
CCDC58-207ENST00000498466 SLC25A30Q5SVS4 291 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 RAB12Q6IQ22 244 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 ZNF833PQ6ZTB9 187 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 GPR148Q8TDV2 347 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 RGP1Q92546 391 aaPredicted RBP10.64□□□□□ -0.71
CCDC58-207ENST00000498466 TMEM106AQ96A25 262 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 SLA2Q9H6Q3 261 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 RANGRFQ9HD47 186 aaPredicted RBP10.64□□□□□ -0.71
CCDC58-207ENST00000498466 KCNIP1Q9NZI2 227 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 RCC2Q9P258 522 aaKnown RBP10.64□□□□□ -0.71
CCDC58-207ENST00000498466 JPT1Q9UK76 154 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 OAZ3Q9UMX2 235 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 AP4S1Q9Y587 144 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 PEX16Q9Y5Y5 336 aa10.64□□□□□ -0.71
CCDC58-207ENST00000498466 SAA2-SAA4A0A096LPE2 208 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 ATP8B1O43520 1251 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 SAA2P0DJI9 122 aaPredicted RBP10.63□□□□□ -0.71
CCDC58-207ENST00000498466 BDKRB2P30411 391 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 GTF2A1P52655 376 aaPredicted RBP10.63□□□□□ -0.71
CCDC58-207ENST00000498466 SNRPGP62308 76 aaKnown RBP10.63□□□□□ -0.71
CCDC58-207ENST00000498466 GPR176Q14439 515 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 AKIRIN2Q53H80 203 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 FAM131AQ6UXB0 335 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 GAPTQ8N292 157 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 LFNGQ8NES3 379 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 OR9G4Q8NGQ1 327 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 RDH12Q96NR8 316 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 CLCC1Q96S66 551 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 HIPK2Q9H2X6 1198 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 ZNF355PQ9NSJ1 428 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 AASSQ9UDR5 926 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 GAB2Q9UQC2 676 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 CEPT1Q9Y6K0 416 aa10.63□□□□□ -0.71
CCDC58-207ENST00000498466 C13orf42A0A1B0GVH6 325 aa10.62□□□□□ -0.71
CCDC58-207ENST00000498466 RBMY1BA6NDE4 496 aaKnown RBP10.62□□□□□ -0.71
CCDC58-207ENST00000498466 RBMY1EA6NEQ0 496 aaKnown RBP10.62□□□□□ -0.71
CCDC58-207ENST00000498466 MAS1P04201 325 aa10.62□□□□□ -0.71
CCDC58-207ENST00000498466 TFAP2AP05549 437 aa10.62□□□□□ -0.71
CCDC58-207ENST00000498466 GSTP1P09211 210 aaKnown RBP10.62□□□□□ -0.71
CCDC58-207ENST00000498466 RBMY1DP0C7P1 496 aaKnown RBP10.62□□□□□ -0.71
CCDC58-207ENST00000498466 FCGR1AP12314 374 aa10.62□□□□□ -0.71
CCDC58-207ENST00000498466 LCN12Q6JVE5 192 aa10.62□□□□□ -0.71
CCDC58-207ENST00000498466 C5orf24Q7Z6I8 188 aa10.62□□□□□ -0.71
CCDC58-207ENST00000498466 OR2AK2Q8NG84 335 aa10.62□□□□□ -0.71
CCDC58-207ENST00000498466 ZNF184Q99676 751 aaPredicted RBP10.62□□□□□ -0.71
CCDC58-207ENST00000498466 THAP7Q9BT49 309 aaPredicted RBP10.62□□□□□ -0.71
CCDC58-207ENST00000498466 ERVK13-1Q9NX77 482 aa10.62□□□□□ -0.71
CCDC58-207ENST00000498466 HERC2O95714 4834 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 UBE2QL1A1L167 161 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 ANKRD34BA5PLL1 514 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 SAC3D1A6NKF1 404 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 YPEL1O60688 119 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 CA11O75493 328 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 FADS2O95864 444 aaKnown RBP10.61□□□□□ -0.71
CCDC58-207ENST00000498466 SYNJ2BPP57105 145 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 HTD2P86397 168 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 RIPK1Q13546 671 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 KLF5Q13887 457 aaPredicted RBP10.61□□□□□ -0.71
CCDC58-207ENST00000498466 Q8N402 240 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 LINC00476Q8WZB0 136 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 SLC7A6OSQ96CW6 309 aaPredicted RBP10.61□□□□□ -0.71
CCDC58-207ENST00000498466 ORAI1Q96D31 301 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 YPEL2Q96QA6 119 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 PLEKHA3Q9HB20 300 aa10.61□□□□□ -0.71
CCDC58-207ENST00000498466 MBNL3Q9NUK0 354 aaKnown RBP10.61□□□□□ -0.71
CCDC58-207ENST00000498466 ORC6Q9Y5N6 252 aa10.61□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms