RNA–Protein interactions for RNA: ENST00000498254.5

CALD1-224, Transcript of caldesmon 1, humanhuman

TSL 3

Gene CALD1, Length 443 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-224ENST00000498254 ZCCHC24Q8N2G6 241 aaKnown RBP2.34□□□□□ -2.03
CALD1-224ENST00000498254 TMEM256Q8N2U0 113 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 DRAM1Q8N682 238 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 OR1P1Q8NH06 330 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 CASTOR1Q8WTX7 329 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 SRSF12Q8WXF0 261 aaKnown RBP2.34□□□□□ -2.03
CALD1-224ENST00000498254 RORBQ92753 470 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 FAM104AQ969W3 186 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 ZHX1-C8orf76Q96EF9 292 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 CAPZA3Q96KX2 299 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 KCTD7Q96MP8 289 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 C18orf15Q96N68 181 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 SULT4A1Q9BR01 284 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 COA1Q9GZY4 146 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 ABCG5Q9H222 651 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 DSN1Q9H410 356 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 ACOT13Q9NPJ3 140 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 HEBP1Q9NRV9 189 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 ZNF355PQ9NSJ1 428 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 RASL12Q9NYN1 266 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 TAS2R13Q9NYV9 303 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 COPZ2Q9P299 210 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 SSR3Q9UNL2 185 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 UTP11Q9Y3A2 253 aaKnown RBP2.34□□□□□ -2.03
CALD1-224ENST00000498254 HSPB11Q9Y547 144 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 ORC6Q9Y5N6 252 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 TTC37Q6PGP7 1564 aa2.34□□□□□ -2.03
CALD1-224ENST00000498254 SMARCA4P51532 1647 aa2.34□□□□□ -2.04
CALD1-224ENST00000498254 YLPM1P49750 1951 aaKnown RBP2.34□□□□□ -2.04
CALD1-224ENST00000498254 C9orf84Q5VXU9 1444 aa2.34□□□□□ -2.04
CALD1-224ENST00000498254 YEATS2Q9ULM3 1422 aa2.34□□□□□ -2.04
CALD1-224ENST00000498254 GAPVD1Q14C86 1478 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ARAP1Q96P48 1450 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 BAZ1AQ9NRL2 1556 aaPredicted RBP2.33□□□□□ -2.04
CALD1-224ENST00000498254 IGLV3-16A0A075B6K0 115 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 A0A096LPI6 279 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 IGKV6D-41A0A0C4DH26 115 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ISPDA4D126 451 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 LINC00862A6NCI5 91 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 PRORSD1PA6NEY8 169 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 OR5H14A6NHG9 310 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 CLDN24A6NM45 220 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 PPP5D1E7EU14 171 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 TRAPPC2LH3BP13 241 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 RBFOX2O43251 390 aaKnown RBP eCLIP2.33□□□□□ -2.04
CALD1-224ENST00000498254 CCNE2O96020 404 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 HLA-AP01891 365 aaKnown RBP2.33□□□□□ -2.04
CALD1-224ENST00000498254 RLN2P04090 185 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ZNF688P0C7X2 276 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 C8orf88P0DMB2 117 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 HIST1H1CP16403 213 aaKnown RBP2.33□□□□□ -2.04
CALD1-224ENST00000498254 PVALBP20472 110 aaPredicted RBP2.33□□□□□ -2.04
CALD1-224ENST00000498254 EVX1P49640 407 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 AQP5P55064 265 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 OR12D2P58182 307 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 GNGT1P63211 74 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 LAMTOR4Q0VGL1 99 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 RSU1Q15404 277 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 GUSBP1Q15486 140 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 PLPPR5Q32ZL2 321 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 DNLZQ5SXM8 178 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 NCMAPQ5T1S8 102 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ZNF684Q5T5D7 378 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 FAM78BQ5VT40 261 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ZNF767PQ75MW2 155 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 CPNE9Q8IYJ1 553 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 C9orf62Q8N4C0 152 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 OR13G1Q8NGZ3 307 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 OR5J2Q8NH18 312 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 OR10A6Q8NH74 314 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 OR1S1Q8NH92 325 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 CIRBP-AS1Q8TBR5 109 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 DOK4Q8TEW6 326 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 SMIM19Q96E16 107 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 SMARCD1Q96GM5 515 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 BIRC8Q96P09 236 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 SIGMAR1Q99720 223 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 PDCD1LG2Q9BQ51 273 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 EMC6Q9BV81 110 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 SFXN3Q9BWM7 321 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 SUCNR1Q9BXA5 334 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 MS4A8Q9BY19 250 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ENY2Q9NPA8 101 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 FBXO6Q9NRD1 293 aaPredicted RBP2.33□□□□□ -2.04
CALD1-224ENST00000498254 C8orf17Q9NRJ1 99 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 C14orf105Q9NVL8 296 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ZNF230Q9UIE0 474 aaPredicted RBP2.33□□□□□ -2.04
CALD1-224ENST00000498254 JPT1Q9UK76 154 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 TMEM14AQ9Y6G1 99 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ENPP4Q9Y6X5 453 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 MYO10Q9HD67 2058 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 MED23Q9ULK4 1368 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 BCL9O00512 1426 aa2.33□□□□□ -2.04
CALD1-224ENST00000498254 ZNF608Q9ULD9 1512 aaPredicted RBP2.32□□□□□ -2.04
CALD1-224ENST00000498254 A0A1B0GX12 115 aa2.32□□□□□ -2.04
CALD1-224ENST00000498254 GMNCA6NCL1 334 aa2.32□□□□□ -2.04
CALD1-224ENST00000498254 BPY2O14599 106 aa2.32□□□□□ -2.04
CALD1-224ENST00000498254 PSPHP1O15172 72 aa2.32□□□□□ -2.04
CALD1-224ENST00000498254 NDUFS5O43920 106 aa2.32□□□□□ -2.04
CALD1-224ENST00000498254 GNG7O60262 68 aa2.32□□□□□ -2.04
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms