RNA–Protein interactions for RNA: ENST00000496907.1

HMGCL-206, Transcript of 3-hydroxy-3-methylglutaryl-CoA lyase, humanhuman

TSL 3

Gene HMGCL, Length 858 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGCL-206ENST00000496907 DEDD2Q8WXF8 326 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 GCDHQ92947 438 aaPredicted RBP4.96□□□□□ -1.62
HMGCL-206ENST00000496907 KIRREL1Q96J84 757 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 NXF2Q9GZY0 626 aaKnown RBP4.96□□□□□ -1.62
HMGCL-206ENST00000496907 TOLLIPQ9H0E2 274 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 AUNIPQ9H7T9 357 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 RAB18Q9NP72 206 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 SIRT7Q9NRC8 400 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 GFOD1Q9NXC2 390 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 ING3Q9NXR8 418 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 PIPOXQ9P0Z9 390 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 GNG12Q9UBI6 72 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 ZNF107Q9UII5 783 aaPredicted RBP4.96□□□□□ -1.62
HMGCL-206ENST00000496907 PITPNC1Q9UKF7 332 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 GAB2Q9UQC2 676 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 MALRD1Q5VYJ5 2156 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 RYR1P21817 5038 aa4.96□□□□□ -1.62
HMGCL-206ENST00000496907 TRAV40A0A0B4J280 105 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 MEIOCA2RUB1 952 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 DPPA5A6NC42 116 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 FABP12A6NFH5 140 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 C12orf77C9JDV5 145 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 RNASEK-C17orf49H0YIS7 233 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 CLDN34H7C241 214 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 TRIM77I1YAP6 450 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 RAB29O14966 203 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 FABP7O15540 132 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 RCC1P18754 421 aaPredicted RBP4.95□□□□□ -1.62
HMGCL-206ENST00000496907 ELK1P19419 428 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 TBPP20226 339 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 NFYBP25208 207 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 TGFBR1P36897 503 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 OR3A3P47888 321 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 LOXL3P58215 753 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 ARPC4P59998 168 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 ACTBP60709 375 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 HLA-DRB3P79483 266 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 HLA-DRB5Q30154 266 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 ACTBL2Q562R1 376 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 KLF17Q5JT82 389 aaPredicted RBP4.95□□□□□ -1.62
HMGCL-206ENST00000496907 SPANXN2Q5MJ10 180 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 FAM71F2Q6NXP2 309 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 LPCAT3Q6P1A2 487 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 TMEM17Q86X19 198 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 HOGA1Q86XE5 327 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 THNSL2Q86YJ6 484 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 OR8H3Q8N146 312 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 FGFRL1Q8N441 504 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 PNKDQ8N490 385 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 ZNF436-AS1Q8NC38 126 aaPredicted RBP4.95□□□□□ -1.62
HMGCL-206ENST00000496907 OR2AK2Q8NG84 335 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 OR10X1Q8NGY0 326 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 RFESDQ8TAC1 157 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 SSMEM1Q8WWF3 244 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 SLC25A38Q96DW6 304 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 DIRAS2Q96HU8 199 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 AKR1E2Q96JD6 320 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 S1PR3Q99500 378 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 GINS4Q9BRT9 223 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 ST6GALNAC5Q9BVH7 336 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 SLIRPQ9GZT3 109 aaKnown RBP4.95□□□□□ -1.62
HMGCL-206ENST00000496907 C6orf62Q9GZU0 229 aaPredicted RBP4.95□□□□□ -1.62
HMGCL-206ENST00000496907 RBM38Q9H0Z9 239 aaKnown RBP4.95□□□□□ -1.62
HMGCL-206ENST00000496907 MMP28Q9H239 520 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 IFT46Q9NQC8 304 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 ABCB10Q9NRK6 738 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 NECAP2Q9NVZ3 263 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 EXTL2Q9UBQ6 330 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 MRPS7Q9Y2R9 242 aaKnown RBP4.95□□□□□ -1.62
HMGCL-206ENST00000496907 KCNK7Q9Y2U2 307 aa4.95□□□□□ -1.62
HMGCL-206ENST00000496907 TRBV6-7A0A0A0MS04 114 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 A0A0B4J203 849 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 VGLL3A8MV65 326 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 ODF3BA8MYP8 253 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 BUB1B-PAK6H3BSN5 160 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 GABARAPH6UMI1 98 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 HPGDSO60760 199 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 IGLV1-47P01700 117 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 HLA-DQB1P01920 261 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 CRYBA1P05813 215 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 FCGR3AP08637 254 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 FAM106CPP0CH98 169 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 IGHV4-38-2P0DP08 117 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 NAT1P18440 290 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 S100GP29377 79 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 TNFSF8P32971 234 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 MC5RP33032 325 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 RCVRNP35243 200 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 SSTR5P35346 364 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 SAA4P35542 130 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 CEACAM6P40199 344 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 ZNF137PP52743 207 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 TAS2R20P59543 309 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 AP3S2P59780 193 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 HILS1P60008 231 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 ZNF45Q02386 682 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 MSMO1Q15800 293 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 MOGAT2Q3SYC2 334 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 PRAMEF5Q5TYX0 476 aa4.94□□□□□ -1.62
HMGCL-206ENST00000496907 Q6YL49 198 aa4.94□□□□□ -1.62
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms