RNA–Protein interactions for RNA: ENST00000495515.1

HDAC6-235, Transcript of histone deacetylase 6, humanhuman

TSL 3

Gene HDAC6, Length 569 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-235ENST00000495515 ABCB10Q9NRK6 738 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 HILPDAQ9Y5L2 63 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 POMT1Q9Y6A1 747 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 SVEP1Q4LDE5 3571 aa13.86□□□□□ -0.19
HDAC6-235ENST00000495515 ANK3Q12955 4377 aaKnown RBP13.85□□□□□ -0.19
HDAC6-235ENST00000495515 A0A1W2PPE3 182 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 TRIM77I1YAP6 450 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 SULT1C2O00338 296 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 ITGB1BP1O14713 200 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 BET1O15155 118 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 PTHLHP12272 177 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 RAB7AP51149 207 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 ARPC4P59998 168 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 LRRC75BQ2VPJ9 315 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 TPTE2P1Q5T6R2 138 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 C5orf24Q7Z6I8 188 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 ZNF439Q8NDP4 499 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 BEST4Q8NFU0 473 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 OR5R1Q8NH85 324 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 C17orf50Q8WW18 174 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 TOMM40LQ969M1 308 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 AJUBAQ96IF1 538 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 GINS4Q9BRT9 223 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 GHITMQ9H3K2 345 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 ANXA10Q9UJ72 324 aa13.85□□□□□ -0.19
HDAC6-235ENST00000495515 JMJD1CQ15652 2540 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 TRBV6-7A0A0A0MS04 114 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 CLDN34H7C241 214 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 HOXA3O43365 443 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-235ENST00000495515 BRS3P32247 399 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 IER3P46695 156 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 MRPS10P82664 201 aaKnown RBP13.84□□□□□ -0.19
HDAC6-235ENST00000495515 IGSF11Q5DX21 431 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 CT45A1Q5HYN5 189 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 FAM53AQ6NSI3 398 aaPredicted RBP13.84□□□□□ -0.19
HDAC6-235ENST00000495515 CT45A3Q8NHU0 189 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 OR1A1Q9P1Q5 309 aa13.84□□□□□ -0.19
HDAC6-235ENST00000495515 IGKV1-6A0A0C4DH72 117 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 DNAJC9-AS1A6NH13 148 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 A6NHS1 94 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 VGLL3A8MV65 326 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 LY6LH3BQJ8 138 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 GAPDHP04406 335 aaKnown RBP13.83□□□□□ -0.2
HDAC6-235ENST00000495515 DYNLT3P51808 116 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 ZNF134P52741 427 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 HERPUD1Q15011 391 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 LDLRAD2Q5SZI1 272 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 FOXB2Q5VYV0 432 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 PYHIN1Q6K0P9 492 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 LYG1Q8N1E2 194 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 GPX8Q8TED1 209 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 FAM216AQ8WUB2 273 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 SSX3Q99909 188 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 TOLLIPQ9H0E2 274 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 RDH8Q9NYR8 311 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 PIPOXQ9P0Z9 390 aa13.83□□□□□ -0.2
HDAC6-235ENST00000495515 IGKV1D-8A0A087WSZ0 117 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 HSD17B6O14756 317 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 SLC31A2O15432 143 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 TXNL1O43396 289 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 VENTXO95231 258 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 TNFSF8P32971 234 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 IL18Q14116 193 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 SLC9A3R2Q15599 337 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 OR8H3Q8N146 312 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 DYNAPQ8N1N2 210 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 GVQW1Q8N7I0 195 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 ZDHHC22Q8N966 263 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 ZFAND2BQ8WV99 257 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 GCDHQ92947 438 aaPredicted RBP13.82□□□□□ -0.2
HDAC6-235ENST00000495515 MXRA5Q9NR99 2828 aa13.82□□□□□ -0.2
HDAC6-235ENST00000495515 MEIS3P1A6NDR6 274 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 FABP12A6NFH5 140 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 H3BUX3 64 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 RAB29O14966 203 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 IGHV4-59P01825 116 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 ZNF137PP52743 207 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 TAS2R46P59540 309 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 UBA52P62987 128 aaKnown RBP13.81□□□□□ -0.2
HDAC6-235ENST00000495515 ZNF816Q0VGE8 651 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-235ENST00000495515 PLA1AQ53H76 456 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 OR5AP2Q8NGF4 316 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 FCAMRQ8WWV6 532 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 S1PR3Q99500 378 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 C11orf54Q9H0W9 315 aaPredicted RBP13.81□□□□□ -0.2
HDAC6-235ENST00000495515 ESM1Q9NQ30 184 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 NECAP2Q9NVZ3 263 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 PITPNC1Q9UKF7 332 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 ANAPC10Q9UM13 185 aa13.81□□□□□ -0.2
HDAC6-235ENST00000495515 RBM7Q9Y580 266 aaKnown RBP13.81□□□□□ -0.2
HDAC6-235ENST00000495515 ST8SIA5O15466 376 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 LANCL1O43813 399 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 RBBP9O75884 186 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 RNASE1P07998 156 aaKnown RBP13.8□□□□□ -0.2
HDAC6-235ENST00000495515 NAT1P18440 290 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 RCVRNP35243 200 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 OR3A3P47888 321 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 ACTBP60709 375 aa13.8□□□□□ -0.2
HDAC6-235ENST00000495515 ACTG1P63261 375 aa13.8□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 41.2 ms