RNA–Protein interactions for RNA: ENST00000494613.5

LIMS2-216, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 2

Gene LIMS2, Length 1,137 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-216ENST00000494613 Q6ZPA2 131 aa12.31□□□□□ -0.44
LIMS2-216ENST00000494613 OR2W3Q7Z3T1 314 aa12.31□□□□□ -0.44
LIMS2-216ENST00000494613 RASL11BQ9BPW5 248 aa12.31□□□□□ -0.44
LIMS2-216ENST00000494613 URM1Q9BTM9 101 aaKnown RBP12.31□□□□□ -0.44
LIMS2-216ENST00000494613 LIN7CQ9NUP9 197 aaKnown RBP12.31□□□□□ -0.44
LIMS2-216ENST00000494613 ABRACLQ9P1F3 81 aa12.31□□□□□ -0.44
LIMS2-216ENST00000494613 JPT1Q9UK76 154 aa12.31□□□□□ -0.44
LIMS2-216ENST00000494613 RAB26Q9ULW5 256 aa12.31□□□□□ -0.44
LIMS2-216ENST00000494613 RGS11O94810 467 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 IGLL1P15814 213 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 GPR12P47775 334 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 PSMD7P51665 324 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 CLDN12P56749 244 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 HMGN3Q15651 99 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 RAB11BQ15907 218 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 KHDC1LQ5JSQ8 128 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 FOXRED2Q8IWF2 684 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 STPG2Q8N412 459 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 OR8H1Q8NGG4 311 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 IL1F10Q8WWZ1 152 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 FAM3DQ96BQ1 224 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 RITA1Q96K30 269 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 ABHD14AQ9BUJ0 271 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 RIMS4Q9H426 269 aaPredicted RBP12.3□□□□□ -0.44
LIMS2-216ENST00000494613 CHMP1AQ9HD42 196 aaPredicted RBP12.3□□□□□ -0.44
LIMS2-216ENST00000494613 ZFP57Q9NU63 452 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 V9GY05 133 aa12.3□□□□□ -0.44
LIMS2-216ENST00000494613 PF4P02776 101 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 OR3A3P47888 321 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 VEGFCP49767 419 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 SLC35B1P78383 322 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 SSX1Q16384 188 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 SVOPQ8N4V2 548 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 SETD6Q8TBK2 473 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 AK3Q9UIJ7 227 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 HSF4Q9ULV5 492 aa12.29□□□□□ -0.44
LIMS2-216ENST00000494613 TRBV6-6A0A0A6YYG2 114 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 FOXI3A8MTJ6 420 aaPredicted RBP12.28□□□□□ -0.44
LIMS2-216ENST00000494613 AP4M1O00189 453 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 ATP6V1G2O95670 118 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 RPL23AP62750 156 aaKnown RBP12.28□□□□□ -0.44
LIMS2-216ENST00000494613 LSAMPQ13449 338 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 TBCEQ15813 527 aaPredicted RBP12.28□□□□□ -0.44
LIMS2-216ENST00000494613 PNLIPRP3Q17RR3 467 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 FOXB2Q5VYV0 432 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 TEX38Q6PEX7 206 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 C18orf65Q6ZTR6 163 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 FAM71E2Q8N5Q1 922 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 COMMD1Q8N668 190 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 PHF21AQ96BD5 680 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 NABP2Q9BQ15 211 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 HDHD3Q9BSH5 251 aaPredicted RBP12.28□□□□□ -0.44
LIMS2-216ENST00000494613 PECRQ9BY49 303 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 STEAP1Q9UHE8 339 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 RAB22AQ9UL26 194 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 BLOC1S6Q9UL45 172 aa12.28□□□□□ -0.44
LIMS2-216ENST00000494613 TRAV1-2A0A0B4J238 106 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 LDLRAD4O15165 306 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 DENRO43583 198 aaKnown RBP12.27□□□□□ -0.45
LIMS2-216ENST00000494613 SOX6P35712 828 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 CEACAM6P40199 344 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 RANBP1P43487 201 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 PLA2G7Q13093 441 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 HES5Q5TA89 166 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 ZNF833PQ6ZTB9 187 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 ZNF367Q7RTV3 350 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 OR2AK2Q8NG84 335 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 ARHGAP5-AS1Q96IT6 56 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 HSPB9Q9BQS6 159 aa12.27□□□□□ -0.45
LIMS2-216ENST00000494613 MRPL20Q9BYC9 149 aaKnown RBP12.27□□□□□ -0.45
LIMS2-216ENST00000494613 TMEM272A0A1B0GTI8 110 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 TRDV1A0A1B0GX56 115 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 SHISA3A0PJX4 238 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 ST8SIA5O15466 376 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 SCTP09683 121 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 CNTFRP26992 372 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 PLAC9Q5JTB6 97 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 CD200R1LQ6Q8B3 271 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 REC114Q7Z4M0 266 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 OR56B1Q8NGI3 324 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 ZNF251Q9BRH9 671 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 AGMATQ9BSE5 352 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 GON7Q9BXV9 100 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 PARP12Q9H0J9 701 aaKnown RBP12.26□□□□□ -0.45
LIMS2-216ENST00000494613 Q9N2K0 584 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 NECAP2Q9NVZ3 263 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 PIPOXQ9P0Z9 390 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 SLC23A1Q9UHI7 598 aa12.26□□□□□ -0.45
LIMS2-216ENST00000494613 SAA2-SAA4A0A096LPE2 208 aa12.25□□□□□ -0.45
LIMS2-216ENST00000494613 PDCD5O14737 125 aa12.25□□□□□ -0.45
LIMS2-216ENST00000494613 RAB29O14966 203 aa12.25□□□□□ -0.45
LIMS2-216ENST00000494613 MRPS14O60783 128 aaKnown RBP12.25□□□□□ -0.45
LIMS2-216ENST00000494613 RPLP1P05386 114 aaKnown RBP12.25□□□□□ -0.45
LIMS2-216ENST00000494613 SAA2P0DJI9 122 aaPredicted RBP12.25□□□□□ -0.45
LIMS2-216ENST00000494613 CT45A6P0DMU7 189 aa12.25□□□□□ -0.45
LIMS2-216ENST00000494613 CT45A5P0DMU8 189 aa12.25□□□□□ -0.45
LIMS2-216ENST00000494613 CT45A7P0DMV0 189 aa12.25□□□□□ -0.45
LIMS2-216ENST00000494613 THBS3P49746 956 aa12.25□□□□□ -0.45
LIMS2-216ENST00000494613 OR10A3P58181 314 aa12.25□□□□□ -0.45
LIMS2-216ENST00000494613 ACTBP60709 375 aa12.25□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms