RNA–Protein interactions for RNA: ENST00000494503.1

UBR4-216, Transcript of ubiquitin protein ligase E3 component n-recognin 4, humanhuman

TSL 3

Gene UBR4, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR4-216ENST00000494503 RHOXF1Q8NHV9 184 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 SMIM19Q96E16 107 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 RITA1Q96K30 269 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 MS4A10Q96PG2 267 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 CLCC1Q96S66 551 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 CHCHD6Q9BRQ6 235 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 C9orf16Q9BUW7 83 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 CST11Q9H112 138 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 FBXL15Q9H469 300 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 ZNF355PQ9NSJ1 428 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 FOXA2Q9Y261 457 aaPredicted RBP7.47□□□□□ -1.21
UBR4-216ENST00000494503 TNCP24821 2201 aa7.47□□□□□ -1.21
UBR4-216ENST00000494503 TRAV8-7A0A075B6U6 113 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 SAA2-SAA4A0A096LPE2 208 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 BAG2O95816 211 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 OR8U9P0C7N5 309 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 SAA2P0DJI9 122 aaPredicted RBP7.46□□□□□ -1.22
UBR4-216ENST00000494503 PPIFP30405 207 aaKnown RBP7.46□□□□□ -1.22
UBR4-216ENST00000494503 CAPGP40121 348 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 ZNF137PP52743 207 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 MED21Q13503 144 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 LRRC36Q1X8D7 754 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 Q499Y3 187 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 ZFP1Q6P2D0 407 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 FAM131AQ6UXB0 335 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 C5orf24Q7Z6I8 188 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 ANKRD13BQ86YJ7 626 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 GHSRQ92847 366 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 GALMQ96C23 342 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 ISOC1Q96CN7 298 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 OR14A2Q96R54 314 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 NABP2Q9BQ15 211 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 FAM103A1Q9BTL3 118 aaKnown RBP7.46□□□□□ -1.22
UBR4-216ENST00000494503 BABAM2Q9NXR7 383 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 ABRACLQ9P1F3 81 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 STEAP1Q9UHE8 339 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 JPT1Q9UK76 154 aa7.46□□□□□ -1.22
UBR4-216ENST00000494503 IRGMA1A4Y4 181 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 H3BNX3 289 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 ST8SIA5O15466 376 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 CA11O75493 328 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 IGLV1-40P01703 118 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 LGALS1P09382 135 aaKnown RBP7.45□□□□□ -1.22
UBR4-216ENST00000494503 FUT3P21217 361 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 DCKP27707 260 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 NDPQ00604 133 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 RUNX1Q01196 453 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 TMEM267Q0VDI3 215 aaPredicted RBP7.45□□□□□ -1.22
UBR4-216ENST00000494503 ACTBL2Q562R1 376 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 YIF1BQ5BJH7 314 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 STEAP3Q658P3 488 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 UNQ5815/PRO19632Q6UWF5 114 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 GLDNQ6ZMI3 551 aaPredicted RBP7.45□□□□□ -1.22
UBR4-216ENST00000494503 ADAMTSL5Q6ZMM2 481 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 SGPP2Q8IWX5 399 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 MYOZ3Q8TDC0 251 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 APH1BQ8WW43 257 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 FLYWCH2Q96CP2 140 aaKnown RBP7.45□□□□□ -1.22
UBR4-216ENST00000494503 NEDD4LQ96PU5 975 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 ELOVL1Q9BW60 279 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 TOLLIPQ9H0E2 274 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 RCC2Q9P258 522 aaKnown RBP7.45□□□□□ -1.22
UBR4-216ENST00000494503 ZNF580Q9UK33 172 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 RNF150Q9ULK6 438 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 FBXO7Q9Y3I1 522 aa7.45□□□□□ -1.22
UBR4-216ENST00000494503 PDCD6O75340 191 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 LALBAP00709 142 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 IGHV4-30-4P0DP06 118 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 ARSBP15848 533 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 IGFBP3P17936 291 aaPredicted RBP7.44□□□□□ -1.22
UBR4-216ENST00000494503 KIAA0141Q14154 515 aaPredicted RBP7.44□□□□□ -1.22
UBR4-216ENST00000494503 RPL39P5Q59GN2 51 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 C6orf141Q5SZD1 244 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 ACSM6Q6P461 480 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 PPP1R27Q86WC6 154 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 GRPEL2Q8TAA5 225 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 MRPL30Q8TCC3 161 aaKnown RBP7.44□□□□□ -1.22
UBR4-216ENST00000494503 CYGBQ8WWM9 190 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 CYYR1Q96J86 154 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 SLC29A1Q99808 456 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 FGF20Q9NP95 211 aaPredicted RBP7.44□□□□□ -1.22
UBR4-216ENST00000494503 METTL1Q9UBP6 276 aaKnown RBP7.44□□□□□ -1.22
UBR4-216ENST00000494503 CLEC2DQ9UHP7 191 aa7.44□□□□□ -1.22
UBR4-216ENST00000494503 EXOSC1Q9Y3B2 195 aaKnown RBP7.44□□□□□ -1.22
UBR4-216ENST00000494503 TRBV5-5A0A0J9YX44 114 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 LCE6AA0A183 80 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 C13orf42A0A1B0GVH6 325 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 ANKRD34BA5PLL1 514 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 FAM90A10PA6NDY2 464 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 FAM90A7PA6NKC0 464 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 FAM90A23PA8MXZ1 464 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 RRHO14718 337 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 MYL12BO14950 172 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 LDLRAD4O15165 306 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 OGG1O15527 345 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 HSPA12AO43301 675 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 SOX15O60248 233 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 YPEL1O60688 119 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 TRGV3P03979 118 aa7.43□□□□□ -1.22
UBR4-216ENST00000494503 HSPB1P04792 205 aaKnown RBP7.43□□□□□ -1.22
Retrieved 100 of 20,778 RNA–protein pairs in 53.3 ms