RNA–Protein interactions for RNA: ENST00000493916.1

SNIP1-203, Transcript of Smad nuclear interacting protein 1, humanhuman

TSL 4

Gene SNIP1, Length 546 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNIP1-203ENST00000493916 Q8N6K4 173 aa18■□□□□ 0.47
SNIP1-203ENST00000493916 C5orf56Q8N8D9 126 aa18■□□□□ 0.47
SNIP1-203ENST00000493916 CD28P10747 220 aa17.99■□□□□ 0.47
SNIP1-203ENST00000493916 RAB6AP20340 208 aa17.99■□□□□ 0.47
SNIP1-203ENST00000493916 LYG1Q8N1E2 194 aa17.99■□□□□ 0.47
SNIP1-203ENST00000493916 SETD6Q8TBK2 473 aa17.99■□□□□ 0.47
SNIP1-203ENST00000493916 EAF1Q96JC9 268 aaPredicted RBP17.99■□□□□ 0.47
SNIP1-203ENST00000493916 HDHD3Q9BSH5 251 aaPredicted RBP17.99■□□□□ 0.47
SNIP1-203ENST00000493916 SSR3Q9UNL2 185 aa17.99■□□□□ 0.47
SNIP1-203ENST00000493916 IGHV3-72A0A0B4J1Y9 119 aa17.98■□□□□ 0.47
SNIP1-203ENST00000493916 SH2D7A6NKC9 451 aaPredicted RBP17.98■□□□□ 0.47
SNIP1-203ENST00000493916 HNF4GQ14541 408 aa17.98■□□□□ 0.47
SNIP1-203ENST00000493916 TPRA1Q86W33 373 aa17.98■□□□□ 0.47
SNIP1-203ENST00000493916 ODF3L1Q8IXM7 274 aa17.98■□□□□ 0.47
SNIP1-203ENST00000493916 OR2T10Q8NGZ9 312 aa17.98■□□□□ 0.47
SNIP1-203ENST00000493916 IL1F10Q8WWZ1 152 aa17.98■□□□□ 0.47
SNIP1-203ENST00000493916 PTX4Q96A99 478 aa17.98■□□□□ 0.47
SNIP1-203ENST00000493916 NOTOA8MTQ0 251 aa17.97■□□□□ 0.47
SNIP1-203ENST00000493916 HLA-DRB3P79483 266 aa17.97■□□□□ 0.47
SNIP1-203ENST00000493916 HIST2H2BDQ6DRA6 164 aa17.97■□□□□ 0.47
SNIP1-203ENST00000493916 NDUFA11Q86Y39 141 aa17.97■□□□□ 0.47
SNIP1-203ENST00000493916 OR2AK2Q8NG84 335 aa17.97■□□□□ 0.47
SNIP1-203ENST00000493916 CMSS1Q9BQ75 279 aaKnown RBP17.97■□□□□ 0.47
SNIP1-203ENST00000493916 Q9N2K0 584 aa17.97■□□□□ 0.47
SNIP1-203ENST00000493916 MOSP00540 346 aa17.96■□□□□ 0.47
SNIP1-203ENST00000493916 NEDD8Q15843 81 aa17.96■□□□□ 0.47
SNIP1-203ENST00000493916 C9orf152Q5JTZ5 239 aa17.96■□□□□ 0.47
SNIP1-203ENST00000493916 OR5AU1Q8NGC0 362 aa17.96■□□□□ 0.47
SNIP1-203ENST00000493916 OR10R2Q8NGX6 335 aa17.96■□□□□ 0.47
SNIP1-203ENST00000493916 RAB3CQ96E17 227 aa17.96■□□□□ 0.47
SNIP1-203ENST00000493916 OR51E2Q9H255 320 aa17.96■□□□□ 0.47
SNIP1-203ENST00000493916 KCNK7Q9Y2U2 307 aa17.96■□□□□ 0.47
SNIP1-203ENST00000493916 A0A0B4J203 849 aa17.95■□□□□ 0.46
SNIP1-203ENST00000493916 GADD45AP24522 165 aa17.95■□□□□ 0.46
SNIP1-203ENST00000493916 LSAMPQ13449 338 aa17.95■□□□□ 0.46
SNIP1-203ENST00000493916 MOGAT2Q3SYC2 334 aa17.95■□□□□ 0.46
SNIP1-203ENST00000493916 FAM71F2Q6NXP2 309 aa17.95■□□□□ 0.46
SNIP1-203ENST00000493916 ZNF833PQ6ZTB9 187 aa17.95■□□□□ 0.46
SNIP1-203ENST00000493916 CENPVQ7Z7K6 275 aaPredicted RBP17.95■□□□□ 0.46
SNIP1-203ENST00000493916 OR8H1Q8NGG4 311 aa17.95■□□□□ 0.46
SNIP1-203ENST00000493916 FAM110DQ8TAY7 271 aaPredicted RBP17.95■□□□□ 0.46
SNIP1-203ENST00000493916 CITED2Q99967 270 aaPredicted RBP17.95■□□□□ 0.46
SNIP1-203ENST00000493916 IFI27L2Q9H2X8 130 aa17.95■□□□□ 0.46
SNIP1-203ENST00000493916 ADARB2-AS1A8MUL3 147 aa17.94■□□□□ 0.46
SNIP1-203ENST00000493916 ZNF736B4DX44 427 aaPredicted RBP17.94■□□□□ 0.46
SNIP1-203ENST00000493916 RAB27BO00194 218 aa17.94■□□□□ 0.46
SNIP1-203ENST00000493916 ITGB1BP1O14713 200 aa17.94■□□□□ 0.46
SNIP1-203ENST00000493916 SLC2A2P11168 524 aaPredicted RBP17.94■□□□□ 0.46
SNIP1-203ENST00000493916 KCTD7Q96MP8 289 aa17.94■□□□□ 0.46
SNIP1-203ENST00000493916 SLC23A1Q9UHI7 598 aa17.94■□□□□ 0.46
SNIP1-203ENST00000493916 WNK1Q9H4A3 2382 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 SAA2-SAA4A0A096LPE2 208 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 SMIM30A4D0T7 59 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 METTL21EPA6NDL7 271 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 MFNGO00587 321 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 SAA2P0DJI9 122 aaPredicted RBP17.93■□□□□ 0.46
SNIP1-203ENST00000493916 HIST1H1DP16402 221 aaKnown RBP17.93■□□□□ 0.46
SNIP1-203ENST00000493916 CD36P16671 472 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 ZBTB25P24278 435 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 CD83Q01151 205 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 NSUN5P1Q3KNT7 163 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 CHCHD6Q9BRQ6 235 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 MRPL20Q9BYC9 149 aaKnown RBP17.93■□□□□ 0.46
SNIP1-203ENST00000493916 PLSCR3Q9NRY6 295 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 LIN7CQ9NUP9 197 aaKnown RBP17.93■□□□□ 0.46
SNIP1-203ENST00000493916 PIPOXQ9P0Z9 390 aa17.93■□□□□ 0.46
SNIP1-203ENST00000493916 NCBP2LA6PVI3 153 aaKnown RBP17.92■□□□□ 0.46
SNIP1-203ENST00000493916 SERPINE3A8MV23 424 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 TNFAIP8O95379 198 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 IGHG2P01859 326 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 SCTP09683 121 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 CD3GP09693 182 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 OR3A3P47888 321 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 MRPS15P82914 257 aaKnown RBP17.92■□□□□ 0.46
SNIP1-203ENST00000493916 SFXN4Q6P4A7 337 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 Q8N9W7 124 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 NABP2Q9BQ15 211 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 OR1A1Q9P1Q5 309 aa17.92■□□□□ 0.46
SNIP1-203ENST00000493916 TRDCB7Z8K6 153 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 RAB29O14966 203 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 ST8SIA5O15466 376 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 OPN1MWP04001 364 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 FCGR3AP08637 254 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 OPN1MW2P0DN77 364 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 OPN1MW3P0DN78 364 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 GNB3P16520 340 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 SDC2P34741 201 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 TCTEX1D4Q5JR98 221 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 OR4X2Q8NGF9 303 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 EDARADDQ8WWZ3 215 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 S1PR3Q99500 378 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 PARP12Q9H0J9 701 aaKnown RBP17.91■□□□□ 0.46
SNIP1-203ENST00000493916 ABCG5Q9H222 651 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 GHITMQ9H3K2 345 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 DAPK2Q9UIK4 370 aa17.91■□□□□ 0.46
SNIP1-203ENST00000493916 A0A087WXM4 84 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 IGKV1-6A0A0C4DH72 117 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 LOC100506127A0A0U1RQW1 187 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 HSPA12AO43301 675 aa17.9■□□□□ 0.46
SNIP1-203ENST00000493916 CEACAM6P40199 344 aa17.9■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms