RNA–Protein interactions for RNA: ENST00000493732.5

NPHP3-209, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,933 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-209ENST00000493732 HOXA1P49639 335 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-209ENST00000493732 ASCL1P50553 236 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 ATP6V1FQ16864 119 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 ALKBH6Q3KRA9 238 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF585BQ52M93 769 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 KHDC3LQ587J8 217 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 AWAT1Q58HT5 328 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 IGFL3Q6UXB1 125 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF66Q6ZN08 573 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 BHLHA15Q7RTS1 189 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-209ENST00000493732 FGFRL1Q8N441 504 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 OR10G4Q8NGN3 311 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 CD300LFQ8TDQ1 290 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 RXFP4Q8TDU9 374 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 CIB3Q96Q77 187 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-209ENST00000493732 RAB9BQ9NP90 201 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF71Q9NQZ8 489 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-209ENST00000493732 FBXO7Q9Y3I1 522 aa8.13□□□□□ -1.11
NPHP3-209ENST00000493732 KLF2Q9Y5W3 355 aaPredicted RBP8.13□□□□□ -1.11
NPHP3-209ENST00000493732 NCOR1O75376 2440 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 A0A0G2JRQ6 117 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 SPAARA0A1B0GVQ0 90 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 MBD3L4A6NDZ8 208 aaPredicted RBP8.12□□□□□ -1.11
NPHP3-209ENST00000493732 MBD3L3A6NE82 208 aaPredicted RBP8.12□□□□□ -1.11
NPHP3-209ENST00000493732 MBD3L5A6NJ08 208 aaPredicted RBP8.12□□□□□ -1.11
NPHP3-209ENST00000493732 C1orf196B1AJZ1 125 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 C12orf77C9JDV5 145 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 H0YL77 283 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 SPINT2O43291 252 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 IGKV1-39P01597 117 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 IGKV1-5P01602 117 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 IGKV1D-39P04432 117 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 CRYBA1P05813 215 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 CECR9P0C854 216 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 GZMHP20718 246 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 PPP1CCP36873 323 aaKnown RBP8.12□□□□□ -1.11
NPHP3-209ENST00000493732 OR3A1P47881 315 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 HTD2P86397 168 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF506Q5JVG8 444 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 VWA1Q6PCB0 445 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 SPSB3Q6PJ21 355 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 WDR82Q6UXN9 313 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 THNSL2Q86YJ6 484 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 ODF3L1Q8IXM7 274 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 C11orf53Q8IXP5 236 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF561Q8N587 486 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 MBD3L2Q8NHZ7 208 aaPredicted RBP8.12□□□□□ -1.11
NPHP3-209ENST00000493732 EDARADDQ8WWZ3 215 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 TAAR6Q96RI8 345 aa8.12□□□□□ -1.11
NPHP3-209ENST00000493732 HSD17B10Q99714 261 aaKnown RBP8.12□□□□□ -1.11
NPHP3-209ENST00000493732 CTNNBIP1Q9NSA3 81 aaPredicted RBP8.12□□□□□ -1.11
NPHP3-209ENST00000493732 IGHV2OR16-5A0A0B4J2B6 119 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 PSPNO60542 156 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 AGFG2O95081 481 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 HBZP02008 142 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 IFNA4P05014 189 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 SNRNP70P08621 437 aaKnown RBP8.11□□□□□ -1.11
NPHP3-209ENST00000493732 CFHR2P36980 270 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 GABRA2P47869 451 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 UBE2KP61086 200 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 LRRC75BQ2VPJ9 315 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 DEFB109BQ30KR1 87 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 KRBOX4Q5JUW0 171 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 CXorf67Q86X51 503 aaPredicted RBP8.11□□□□□ -1.11
NPHP3-209ENST00000493732 LILRB2Q8N423 598 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 SFT2D1Q8WV19 159 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 C14orf79Q96F83 325 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 TIMM9Q9Y5J7 89 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 WDFY3Q8IZQ1 3526 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 TRAV39A0A0B4J263 110 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 MEX3AA1L020 520 aaKnown RBP8.11□□□□□ -1.11
NPHP3-209ENST00000493732 TNFSF13O75888 250 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 CGAP01215 116 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 IFNA1P01562 189 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 PTAFRP25105 342 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 TAGLN2P37802 199 aaKnown RBP8.11□□□□□ -1.11
NPHP3-209ENST00000493732 FABP6P51161 128 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 TNFRSF9Q07011 255 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 PMS2P11Q13670 270 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 TIMM23BQ5SRD1 257 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 SP5Q6BEB4 398 aaPredicted RBP8.11□□□□□ -1.11
NPHP3-209ENST00000493732 Q6ZRM9 215 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 ZNF610Q8N9Z0 462 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 MBD3L1Q8WWY6 194 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 STARD4Q96DR4 205 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 OR2D2Q9H210 308 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 SAV1Q9H4B6 383 aaPredicted RBP8.11□□□□□ -1.11
NPHP3-209ENST00000493732 HSPB7Q9UBY9 170 aa8.11□□□□□ -1.11
NPHP3-209ENST00000493732 A0A087WWC5 75 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 IGHV1-18A0A0C4DH31 117 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 B4DEV8 164 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 RAB29O14966 203 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 GPR37O15354 613 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 PPIHO43447 177 aaKnown RBP8.1□□□□□ -1.11
NPHP3-209ENST00000493732 SOX15O60248 233 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 CLDN14O95500 239 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 PTBP3O95758 552 aaKnown RBP8.1□□□□□ -1.11
NPHP3-209ENST00000493732 MBP02144 154 aa8.1□□□□□ -1.11
NPHP3-209ENST00000493732 CRYABP02511 175 aaKnown RBP8.1□□□□□ -1.11
NPHP3-209ENST00000493732 OR13C7P0DN81 318 aa8.1□□□□□ -1.11
Retrieved 100 of 20,778 RNA–protein pairs in 27.3 ms