RNA–Protein interactions for RNA: ENST00000493601.5

PTPRU-208, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 5

Gene PTPRU, Length 695 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-208ENST00000493601 NHLRC4P0CG21 123 aaPredicted RBP12.97□□□□□ -0.33
PTPRU-208ENST00000493601 LY6G6FQ5SQ64 297 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 C6orf141Q5SZD1 244 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 ZNF833PQ6ZTB9 187 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 ODF3L1Q8IXM7 274 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 OR2AK2Q8NG84 335 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 UBE2E2Q96LR5 201 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 NEDD4LQ96PU5 975 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 YPEL2Q96QA6 119 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 NABP2Q9BQ15 211 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 OR51J1Q9H342 316 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 PLCXD1Q9NUJ7 323 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 ABRACLQ9P1F3 81 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 ERGIC3Q9Y282 383 aa12.97□□□□□ -0.33
PTPRU-208ENST00000493601 SAA2-SAA4A0A096LPE2 208 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 ATP6V0E1O15342 81 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 OR8U8P0C7N1 319 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 SAA2P0DJI9 122 aaPredicted RBP12.96□□□□□ -0.33
PTPRU-208ENST00000493601 CHATP28329 748 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 ECI1P42126 302 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 RCN1Q15293 331 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 HMGN3Q15651 99 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 FAM71F2Q6NXP2 309 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 NANOGP1Q8N7R0 232 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 OR11H1Q8NG94 326 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 PRR25Q96S07 402 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 TMEM59Q9BXS4 323 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 PARP11Q9NR21 331 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 KIAA1456Q9P272 454 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 STEAP1Q9UHE8 339 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 VSIG4Q9Y279 399 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 WSB1Q9Y6I7 421 aa12.96□□□□□ -0.33
PTPRU-208ENST00000493601 IGLV1-40P01703 118 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 PPIFP30405 207 aaKnown RBP12.95□□□□□ -0.34
PTPRU-208ENST00000493601 OR3A3P47888 321 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 RPS27AP62979 156 aaKnown RBP12.95□□□□□ -0.34
PTPRU-208ENST00000493601 RUNX1Q01196 453 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 GABPB1Q06547 395 aaPredicted RBP12.95□□□□□ -0.34
PTPRU-208ENST00000493601 C5orf64Q2M2E5 130 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 ZNF260Q3ZCT1 412 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 GLT8D1Q68CQ7 371 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 LAIR2Q6ISS4 152 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 MS4A15Q8N5U1 240 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 BPIFB6Q8NFQ5 453 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 FBLIM1Q8WUP2 373 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 IL1F10Q8WWZ1 152 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 PHYHIPQ92561 330 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 CYYR1Q96J86 154 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 SULT4A1Q9BR01 284 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 MND1Q9BWT6 205 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 ANKRD60Q9BZ19 345 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 SCOCQ9UIL1 159 aa12.95□□□□□ -0.34
PTPRU-208ENST00000493601 LSM4Q9Y4Z0 139 aaKnown RBP12.95□□□□□ -0.34
PTPRU-208ENST00000493601 IGHV7-81A0A0B4J1V7 117 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 TRAV41A0A0B4J266 112 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 G3V318 75 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 I3L521 148 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 VSIG8P0DPA2 414 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 CNTFRP26992 372 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 INSL3P51460 131 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 ZNF616Q08AN1 781 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 ACSM3Q53FZ2 586 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 RBM48Q5RL73 367 aaKnown RBP12.94□□□□□ -0.34
PTPRU-208ENST00000493601 MOB1BQ7L9L4 216 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 C6orf201Q7Z4U5 140 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 ZNF491Q8N8L2 437 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 NPBQ8NG41 125 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 OR1N2Q8NGR9 330 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 KCNG3Q8TAE7 436 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 RITA1Q96K30 269 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 KLK15Q9H2R5 256 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 IFI27L2Q9H2X8 130 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 GNB4Q9HAV0 340 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 FKBP14Q9NWM8 211 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 ZNF256Q9Y2P7 627 aaPredicted RBP12.94□□□□□ -0.34
PTPRU-208ENST00000493601 U3KQK5 164 aa12.94□□□□□ -0.34
PTPRU-208ENST00000493601 NDUFA3O95167 84 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 BLVRBP30043 206 aaPredicted RBP12.93□□□□□ -0.34
PTPRU-208ENST00000493601 INSL4Q14641 139 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 FAM27D1Q5T7N8 215 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 OR10K2Q6IF99 312 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 LIN54Q6MZP7 749 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 C5orf24Q7Z6I8 188 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 LRRTM1Q86UE6 522 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 SVOPQ8N4V2 548 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 FAAP24Q9BTP7 215 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 TMED9Q9BVK6 235 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 VCXQ9H320 206 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 CHMP1AQ9HD42 196 aaPredicted RBP12.93□□□□□ -0.34
PTPRU-208ENST00000493601 PIPOXQ9P0Z9 390 aa12.93□□□□□ -0.34
PTPRU-208ENST00000493601 OR5H14A6NHG9 310 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 RAB29O14966 203 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 ST8SIA5O15466 376 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 NAPSAO96009 420 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 RAB9AP51151 201 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 GNB1P62873 340 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 KIAA0141Q14154 515 aaPredicted RBP12.92□□□□□ -0.34
PTPRU-208ENST00000493601 C1orf100Q5SVJ3 147 aa12.92□□□□□ -0.34
PTPRU-208ENST00000493601 OGFRL1Q5TC84 451 aaPredicted RBP12.92□□□□□ -0.34
PTPRU-208ENST00000493601 RNLSQ5VYX0 342 aa12.92□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 45.6 ms