RNA–Protein interactions for RNA: ENST00000492270.1

UPF3A-209, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 2 BASIC

Gene UPF3A, Length 494 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-209ENST00000492270 FGF16O43320 207 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 KCNAB3O43448 404 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 YPEL1O60688 119 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 RAB3BP20337 219 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 TCTEX1D4Q5JR98 221 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 STEAP3Q658P3 488 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 ZNF773Q6PK81 442 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 CENPVQ7Z7K6 275 aaPredicted RBP19.57■□□□□ 0.72
UPF3A-209ENST00000492270 ODF3L1Q8IXM7 274 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 YPEL2Q96QA6 119 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 ABRACLQ9P1F3 81 aa19.57■□□□□ 0.72
UPF3A-209ENST00000492270 TXNL1O43396 289 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 WIPF1O43516 503 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 GALP22466 123 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 CD1BP29016 333 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 MOGAT2Q3SYC2 334 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 MOB1BQ7L9L4 216 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 NDUFA11Q86Y39 141 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 OR56B1Q8NGI3 324 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 OR2T10Q8NGZ9 312 aa19.56■□□□□ 0.72
UPF3A-209ENST00000492270 TXNL4BQ9NX01 149 aaKnown RBP19.56■□□□□ 0.72
UPF3A-209ENST00000492270 TRBV6-6A0A0A6YYG2 114 aa19.55■□□□□ 0.72
UPF3A-209ENST00000492270 A0A1W2PRX2 142 aa19.55■□□□□ 0.72
UPF3A-209ENST00000492270 LANCL1O43813 399 aa19.55■□□□□ 0.72
UPF3A-209ENST00000492270 CD83Q01151 205 aa19.55■□□□□ 0.72
UPF3A-209ENST00000492270 DEFA6Q01524 100 aa19.55■□□□□ 0.72
UPF3A-209ENST00000492270 PARP12Q9H0J9 701 aaKnown RBP19.55■□□□□ 0.72
UPF3A-209ENST00000492270 RAB22AQ9UL26 194 aa19.55■□□□□ 0.72
UPF3A-209ENST00000492270 STUB1Q9UNE7 303 aa19.55■□□□□ 0.72
UPF3A-209ENST00000492270 NCBP2LA6PVI3 153 aaKnown RBP19.54■□□□□ 0.72
UPF3A-209ENST00000492270 RGS11O94810 467 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 MOSP00540 346 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 SLC2A2P11168 524 aaPredicted RBP19.54■□□□□ 0.72
UPF3A-209ENST00000492270 OR3A3P47888 321 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 HLA-DRB3P79483 266 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 LSAMPQ13449 338 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 LY6G6FQ5SQ64 297 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 OR2AK2Q8NG84 335 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 NOL4LQ96MY1 436 aaPredicted RBP19.54■□□□□ 0.72
UPF3A-209ENST00000492270 CMSS1Q9BQ75 279 aaKnown RBP19.54■□□□□ 0.72
UPF3A-209ENST00000492270 MRPL20Q9BYC9 149 aaKnown RBP19.54■□□□□ 0.72
UPF3A-209ENST00000492270 RIMS4Q9H426 269 aaPredicted RBP19.54■□□□□ 0.72
UPF3A-209ENST00000492270 Q9N2K0 584 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 C12orf4Q9NQ89 552 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 LINC00527Q9UJ94 153 aa19.54■□□□□ 0.72
UPF3A-209ENST00000492270 ST8SIA5O15466 376 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 FGF9P31371 208 aaPredicted RBP19.53■□□□□ 0.72
UPF3A-209ENST00000492270 C1QL4Q86Z23 238 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 Q8N9W7 124 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 R3HDM4Q96D70 268 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 OR51E2Q9H255 320 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 IFI27L2Q9H2X8 130 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 PLSCR3Q9NRY6 295 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 OR1A1Q9P1Q5 309 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 KCNK7Q9Y2U2 307 aa19.53■□□□□ 0.72
UPF3A-209ENST00000492270 SAA2-SAA4A0A096LPE2 208 aa19.52■□□□□ 0.72
UPF3A-209ENST00000492270 LINC01548A6NM66 108 aa19.52■□□□□ 0.72
UPF3A-209ENST00000492270 OPN1MWP04001 364 aa19.52■□□□□ 0.72
UPF3A-209ENST00000492270 SCTP09683 121 aa19.52■□□□□ 0.72
UPF3A-209ENST00000492270 SAA2P0DJI9 122 aaPredicted RBP19.52■□□□□ 0.72
UPF3A-209ENST00000492270 OPN1MW2P0DN77 364 aa19.52■□□□□ 0.72
UPF3A-209ENST00000492270 OPN1MW3P0DN78 364 aa19.52■□□□□ 0.72
UPF3A-209ENST00000492270 NEDD8Q15843 81 aa19.52■□□□□ 0.72
UPF3A-209ENST00000492270 IGHG2P01859 326 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 RANBP1P43487 201 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 F2RL1P55085 397 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 KCTD21Q4G0X4 260 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 ZNF833PQ6ZTB9 187 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 SLC35E3Q7Z769 313 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 RAB3CQ96E17 227 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 NABP2Q9BQ15 211 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 SLC23A1Q9UHI7 598 aa19.51■□□□□ 0.71
UPF3A-209ENST00000492270 TCRBV4S1A1TA0A5B7 111 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 PSMB11A5LHX3 300 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 SERPINE3A8MV23 424 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 RAB6AP20340 208 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 ZNF329Q86UD4 541 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 OR4X2Q8NGF9 303 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 OR10R2Q8NGX6 335 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 S1PR3Q99500 378 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 RNF167Q9H6Y7 350 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 LIN7CQ9NUP9 197 aaKnown RBP19.5■□□□□ 0.71
UPF3A-209ENST00000492270 SSR3Q9UNL2 185 aa19.5■□□□□ 0.71
UPF3A-209ENST00000492270 A0A075B6Q4 140 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 IGKV1-6A0A0C4DH72 117 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 RAB27BO00194 218 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 GNB3P16520 340 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 RPL39P5Q59GN2 51 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 FAM71E2Q8N5Q1 922 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 OR4F17Q8NGA8 305 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 ABHD14BQ96IU4 210 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 OR4F4Q96R69 305 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 ZNF251Q9BRH9 671 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 ABCG5Q9H222 651 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 MGAT4AQ9UM21 535 aa19.49■□□□□ 0.71
UPF3A-209ENST00000492270 NOTOA8MTQ0 251 aa19.48■□□□□ 0.71
UPF3A-209ENST00000492270 MFNGO00587 321 aa19.48■□□□□ 0.71
UPF3A-209ENST00000492270 CD3GP09693 182 aa19.48■□□□□ 0.71
UPF3A-209ENST00000492270 GPR12P47775 334 aa19.48■□□□□ 0.71
UPF3A-209ENST00000492270 KHDC1LQ5JSQ8 128 aa19.48■□□□□ 0.71
Retrieved 100 of 20,778 RNA–protein pairs in 32.3 ms