RNA–Protein interactions for RNA: ENST00000492170.1

MRPL55-231, Transcript of mitochondrial ribosomal protein L55, human

TSL 5

Gene MRPL55, Length 241 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MRPL55-231	ENST00000492170	AWAT2	Q6E213	333 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	RAB12	Q6IQ22	244 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	TRAT1	Q6PIZ9	186 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	GLIPR1L1	Q6UWM5	242 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	LCNL1	Q6ZST4	164 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	PRR18	Q8N4B5	295 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	FAM71E2	Q8N5Q1	922 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	RNF152	Q8N8N0	203 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	ZNF439	Q8NDP4	499 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	OR10V1	Q8NGI7	309 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	OR4K15	Q8NH41	348 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	MUL1	Q969V5	352 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	PLSCR3	Q9NRY6	295 aa		12.03	□□□□□ -0.48
MRPL55-231	ENST00000492170	ZNF736	B4DX44	427 aa	Predicted RBP	12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	CA11	O75493	328 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	ARL6IP5	O75915	188 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	HBZ	P02008	142 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	OR5H8	P0DN80	308 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	GAL	P22466	123 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	LUM	P51884	338 aa	Predicted RBP	12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	C1orf100	Q5SVJ3	147 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	C9orf66	Q5T8R8	295 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	HSPB9	Q9BQS6	159 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	PEX16	Q9Y5Y5	336 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	TENM3	Q9P273	2699 aa		12.02	□□□□□ -0.49
MRPL55-231	ENST00000492170	FAM90A10P	A6NDY2	464 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	FAM90A7P	A6NKC0	464 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	FAM90A23P	A8MXZ1	464 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	LANCL1	O43813	399 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	IGHG4	P01861	327 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	F2RL1	P55085	397 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	CFHR3	Q02985	330 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	LSAMP	Q13449	338 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	CT45A1	Q5HYN5	189 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	STEAP3	Q658P3	488 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	GLT8D1	Q68CQ7	371 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	GAPT	Q8N292	157 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	OR1L1	Q8NH94	360 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	CT45A3	Q8NHU0	189 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	C4orf3	Q8WVX3	66 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	GFI1	Q99684	422 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	GHRL	Q9UBU3	117 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	ZNF107	Q9UII5	783 aa	Predicted RBP	12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	ZNF580	Q9UK33	172 aa		12.01	□□□□□ -0.49
MRPL55-231	ENST00000492170	TRDV1	A0A1B0GX56	115 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	IGF1	P05019	195 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	GLA	P06280	429 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	NHLRC4	P0CG21	123 aa	Predicted RBP	12	□□□□□ -0.49
MRPL55-231	ENST00000492170	MGMT	P16455	207 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	RCC1	P18754	421 aa	Predicted RBP	12	□□□□□ -0.49
MRPL55-231	ENST00000492170	PSMB9	P28065	219 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	ZNF134	P52741	427 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	MMD	Q15546	238 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	KCTD7	Q96MP8	289 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	SELENOI	Q9C0D9	397 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	BANF2	Q9H503	90 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	OR2S2	Q9NQN1	319 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	KCNIP1	Q9NZI2	227 aa		12	□□□□□ -0.49
MRPL55-231	ENST00000492170	RYR3	Q15413	4870 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	SEC14L6	B5MCN3	397 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	SLC22A1	O15245	554 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	CRTAP	O75718	401 aa	Predicted RBP	11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	TNFAIP8	O95379	198 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	UBB	P0CG47	229 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	SLC2A2	P11168	524 aa	Predicted RBP	11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	FUT3	P21217	361 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	CALR	P27797	417 aa	Known RBP	11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	PSMB8	P28062	276 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	ZNF554	Q86TJ5	538 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170		Q96M66	194 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	PRR25	Q96S07	402 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	CHCHD6	Q9BRQ6	235 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	ABHD14A	Q9BUJ0	271 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	TAF9B	Q9HBM6	251 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	JPT1	Q9UK76	154 aa		11.99	□□□□□ -0.49
MRPL55-231	ENST00000492170	TRAV1-2	A0A0B4J238	106 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	SHISA3	A0PJX4	238 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	UBE2QL1	A1L167	161 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	VSIG8	P0DPA2	414 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	FGF9	P31371	208 aa	Predicted RBP	11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	ECI1	P42126	302 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	FHL3	Q13643	280 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	MORN2	Q502X0	79 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	TMEM65	Q6PI78	240 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	OR6M1	Q8NGM8	313 aa		11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	MBNL3	Q9NUK0	354 aa	Known RBP	11.98	□□□□□ -0.49
MRPL55-231	ENST00000492170	TRIM64C	A6NLI5	447 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	SLC17A2	O00624	439 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	PDCD6	O75340	191 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	OR8U8	P0C7N1	319 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	HTR2C	P28335	458 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	ACTB	P60709	375 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	QRFP	P83859	136 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	GNMT	Q14749	295 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	OR11H1	Q8NG94	326 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	OR52L2P	Q8NGH6	319 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	MRPL30	Q8TCC3	161 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	MYOZ3	Q8TDC0	251 aa		11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	RBMXL1	Q96E39	390 aa	Known RBP	11.97	□□□□□ -0.49
MRPL55-231	ENST00000492170	ZNF251	Q9BRH9	671 aa		11.97	□□□□□ -0.49

Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms