RNA–Protein interactions for RNA: ENST00000490889.2

SRGAP3-209, Transcript of SLIT-ROBO Rho GTPase activating protein 3, humanhuman

TSL 4

Gene SRGAP3, Length 622 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRGAP3-209ENST00000490889 JPT1Q9UK76 154 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 VSIG4Q9Y279 399 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 FBXO7Q9Y3I1 522 aa12.89□□□□□ -0.35
SRGAP3-209ENST00000490889 NBR2O15453 112 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 CA11O75493 328 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 OR8U8P0C7N1 319 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 CHATP28329 748 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 BLVRBP30043 206 aaPredicted RBP12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 ZNF616Q08AN1 781 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 C5orf64Q2M2E5 130 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 ZNF833PQ6ZTB9 187 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 DCUN1D4Q92564 292 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 CHCHD6Q9BRQ6 235 aa12.88□□□□□ -0.35
SRGAP3-209ENST00000490889 SAA2-SAA4A0A096LPE2 208 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 TRAV41A0A0B4J266 112 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 SOX15O60248 233 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 PDCD6O75340 191 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 LY86O95711 162 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 BAG2O95816 211 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 GLAP06280 429 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 SAA2P0DJI9 122 aaPredicted RBP12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 CAPGP40121 348 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 RAB9AP51151 201 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 HTD2P86397 168 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 C19orf54Q5BKX5 351 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 LAIR2Q6ISS4 152 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 TMEM65Q6PI78 240 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 ZNF554Q86TJ5 538 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 CDH26Q8IXH8 852 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 C10orf67Q8IYJ2 551 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 MINDY2Q8NBR6 621 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 CASTOR1Q8WTX7 329 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 ZNF251Q9BRH9 671 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 IFI27L2Q9H2X8 130 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 ISYNA1Q9NPH2 558 aa12.87□□□□□ -0.35
SRGAP3-209ENST00000490889 SORL1Q92673 2214 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 YPEL1O60688 119 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 NDUFA3O95167 84 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 INSL3P51460 131 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 ST3GAL4Q11206 333 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 INSL4Q14641 139 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 HMGN3Q15651 99 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 LRRC36Q1X8D7 754 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 OR10K2Q6IF99 312 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 NPBQ8NG41 125 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 CYGBQ8WWM9 190 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 DLX4Q92988 240 aaPredicted RBP12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 YPEL2Q96QA6 119 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 SULT4A1Q9BR01 284 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 CHCHD3Q9NX63 227 aaKnown RBP12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 KCNIP1Q9NZI2 227 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 SMAD5-AS1Q9Y6J3 95 aa12.86□□□□□ -0.35
SRGAP3-209ENST00000490889 C3orf84H3BNL1 204 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 OVOL1O14753 267 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 CELP19835 753 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 SLURP1P55000 103 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 ECSCRQ19T08 205 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 LY6G6FQ5SQ64 297 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 LIN54Q6MZP7 749 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 FAM131AQ6UXB0 335 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 SBSPONQ8IVN8 264 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 NKAIN3Q8N8D7 197 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 PARP12Q9H0J9 701 aaKnown RBP12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 TPSG1Q9NRR2 321 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 TENM2Q9NT68 2774 aa12.85□□□□□ -0.35
SRGAP3-209ENST00000490889 A0A1W2PN81 502 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 EFCAB10A6NFE3 127 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 ST8SIA5O15466 376 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 SNRPBP14678 240 aaKnown RBP12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 CHRNA7P36544 502 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 CRIP2P52943 208 aaPredicted RBP12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 TAS2R43P59537 309 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 MED21Q13503 144 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 FAM27D1Q5T7N8 215 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 OVCH2Q7RTZ1 564 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 ZNF429Q86V71 674 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 OR2AK2Q8NG84 335 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 UQCC2Q9BRT2 126 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 FAAP24Q9BTP7 215 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 KCNK15Q9H427 330 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 FBXL15Q9H469 300 aa12.84□□□□□ -0.35
SRGAP3-209ENST00000490889 IGHV4OR15-8A0A075B7B6 117 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 A0A087WW49 117 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 FCN1O00602 326 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 SAP30O75446 220 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 CD1AP06126 327 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 EGR2P11161 476 aaPredicted RBP12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 SPNP16150 400 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 RPL39P5Q59GN2 51 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 TTC23Q5W5X9 447 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 GLDNQ6ZMI3 551 aaPredicted RBP12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 C6orf201Q7Z4U5 140 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 SETD9Q8NE22 299 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 IL1F10Q8WWZ1 152 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 GALMQ96C23 342 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 RCHY1Q96PM5 261 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 NICN1Q9BSH3 213 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 TOLLIPQ9H0E2 274 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 KIAA1456Q9P272 454 aa12.83□□□□□ -0.36
SRGAP3-209ENST00000490889 GHRLQ9UBU3 117 aa12.83□□□□□ -0.36
Retrieved 100 of 20,778 RNA–protein pairs in 58.9 ms