RNA–Protein interactions for RNA: ENST00000490504.5

PCCB-218, Transcript of propionyl-CoA carboxylase subunit beta, humanhuman

TSL 3 BASIC

Gene PCCB, Length 1,613 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PCCB-218ENST00000490504 TMEM106BQ9NUM4 274 aa12.96□□□□□ -0.33
PCCB-218ENST00000490504 OPN4Q9UHM6 478 aa12.96□□□□□ -0.33
PCCB-218ENST00000490504 TRAV20A0A0B4J274 112 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 CRYM-AS1A6NIL9 109 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 DBX1A6NMT0 343 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 G3V3Q6 166 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 RGS11O94810 467 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 TNFRSF1AP19438 455 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 SLC9A3R2Q15599 337 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 KCTD9Q7L273 389 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 C5orf24Q7Z6I8 188 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 SGPP2Q8IWX5 399 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 ASCC1Q8N9N2 400 aaKnown RBP12.95□□□□□ -0.34
PCCB-218ENST00000490504 ZBTB8BQ8NAP8 495 aaPredicted RBP12.95□□□□□ -0.34
PCCB-218ENST00000490504 RAB39BQ96DA2 213 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 RSRP1Q9BUV0 290 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 METRNQ9UJH8 293 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 IGKV1D-17A0A075B6S4 117 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 TRBV6-7A0A0A0MS04 114 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 NPIPB11E5RHQ5 1161 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 TFF1P04155 84 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 IRF2P14316 349 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 PIGPP57054 158 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 PAX5Q02548 391 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 HMGN3Q15651 99 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 OR11H4Q8NGC9 324 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 OR10J5Q8NHC4 309 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 KIRREL1Q96J84 757 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 KCNIP1Q9NZI2 227 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 PPP1R3CQ9UQK1 317 aa12.95□□□□□ -0.34
PCCB-218ENST00000490504 TANC2Q9HCD6 1990 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 KIAA2026Q5HYC2 2103 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 IGHV3OR15-7A0A075B7D8 119 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 TEX13DA0A0J9YY54 714 aaPredicted RBP12.94□□□□□ -0.34
PCCB-218ENST00000490504 ZNF737O75373 536 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 AVPP01185 164 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 IGHV2-70P01814 119 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 CD80P33681 288 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 AESQ08117 197 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 SRSF4Q08170 494 aaKnown RBP12.94□□□□□ -0.34
PCCB-218ENST00000490504 C1orf229Q6ZS94 237 aaPredicted RBP12.94□□□□□ -0.34
PCCB-218ENST00000490504 C9orf62Q8N4C0 152 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 CCDC71LQ8N9Z2 235 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 PPP1R35Q8TAP8 253 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 WDR89Q96FK6 387 aaPredicted RBP12.94□□□□□ -0.34
PCCB-218ENST00000490504 COQ2Q96H96 371 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 NAA60Q9H7X0 242 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 KIF25Q9UIL4 384 aa12.94□□□□□ -0.34
PCCB-218ENST00000490504 TRAV39A0A0B4J263 110 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 LRRC30A6NM36 301 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 CCSO14618 274 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 GABRA2P47869 451 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 ANKRD55Q3KP44 614 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 Q5BKY6 102 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 KRBOX4Q5JUW0 171 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 LAMTOR1Q6IAA8 161 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 H1FOOQ8IZA3 346 aaPredicted RBP12.93□□□□□ -0.34
PCCB-218ENST00000490504 FAM185AQ8N0U4 392 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 ZNF565Q8N9K5 539 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 ANGPTL6Q8NI99 470 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 IL1F10Q8WWZ1 152 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 SNX22Q96L94 193 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 PDCD10Q9BUL8 212 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 TAF9BQ9HBM6 251 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 RAB18Q9NP72 206 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 SLC2A9Q9NRM0 540 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 PLSCR3Q9NRY6 295 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 BOLA1Q9Y3E2 137 aa12.93□□□□□ -0.34
PCCB-218ENST00000490504 OOEPA6NGQ2 149 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 CYB5R3P00387 301 aaPredicted RBP12.92□□□□□ -0.34
PCCB-218ENST00000490504 PHLDA2Q53GA4 152 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 C6orf183Q5T699 404 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 SECTM1Q8WVN6 248 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 RTN4IP1Q8WWV3 396 aaPredicted RBP12.92□□□□□ -0.34
PCCB-218ENST00000490504 GALNT14Q96FL9 552 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 SLC5A7Q9GZV3 580 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 KCNIP3Q9Y2W7 256 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 OR2W1Q9Y3N9 320 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 HSPB11Q9Y547 144 aa12.92□□□□□ -0.34
PCCB-218ENST00000490504 FAM25EA8MYX2 175 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 MGST3O14880 152 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 ZFP36P26651 326 aaKnown RBP12.91□□□□□ -0.34
PCCB-218ENST00000490504 RND3P61587 244 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 LCN2P80188 198 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 STUMQ69YW2 141 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 TRAT1Q6PIZ9 186 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 GSG1LQ6UXU4 331 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 PRR18Q8N4B5 295 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 GRPEL2Q8TAA5 225 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 OR1A1Q9P1Q5 309 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 LOC105371242A0A075B767 164 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 IGKV1D-13A0A0B4J2D9 117 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 TMEM178BH3BS89 294 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 GPR31O00270 319 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 HSPA12AO43301 675 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 SNAPC5O75971 98 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 IGKV1-13P0DP09 117 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 GNRHRP30968 328 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 GLIPR1P48060 266 aa12.91□□□□□ -0.34
PCCB-218ENST00000490504 FGL1Q08830 312 aa12.91□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 27.1 ms