RNA–Protein interactions for RNA: ENST00000489961.1

VPS13D-210, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 5

Gene VPS13D, Length 443 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-210ENST00000489961 ESM1Q9NQ30 184 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 IFT46Q9NQC8 304 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 EXTL2Q9UBQ6 330 aa8.8□□□□□ -1
VPS13D-210ENST00000489961 MRPS7Q9Y2R9 242 aaKnown RBP8.8□□□□□ -1
VPS13D-210ENST00000489961 VGLL3A8MV65 326 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 LY6LH3BQJ8 138 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 H3BUX3 64 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 CTDSP2O14595 271 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 BET1O15155 118 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 SLC31A2O15432 143 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 TPPPO94811 219 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 IGHV4-59P01825 116 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 CTXN2P0C2S0 81 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 PTHLHP12272 177 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 PAX6P26367 422 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 BRS3P32247 399 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 CEACAM6P40199 344 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 RAB7AP51149 207 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 PLA1AQ53H76 456 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 CT45A1Q5HYN5 189 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 HOGA1Q86XE5 327 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 LAX1Q8IWV1 398 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 DYNAPQ8N1N2 210 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 OR10J5Q8NHC4 309 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 CT45A3Q8NHU0 189 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 C15orf40Q8WUR7 153 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 GINS4Q9BRT9 223 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 CABLES2Q9BTV7 478 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 MIXL1Q9H2W2 232 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 TNFRSF19Q9NS68 423 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 OR1A1Q9P1Q5 309 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 C2CD3Q4AC94 2353 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 NF1P21359 2839 aa8.79□□□□□ -1
VPS13D-210ENST00000489961 SVEP1Q4LDE5 3571 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 IGKV1D-8A0A087WSZ0 117 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 TRBV6-7A0A0A0MS04 114 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 IGKV1-6A0A0C4DH72 117 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 ITGB1BP1O14713 200 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 HSD17B6O14756 317 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 HLA-DQB1P01920 261 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 GAPDHP04406 335 aaKnown RBP8.78□□□□□ -1
VPS13D-210ENST00000489961 RNASE1P07998 156 aaKnown RBP8.78□□□□□ -1
VPS13D-210ENST00000489961 DYNLT3P51808 116 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 ZNF134P52741 427 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 ARPC4P59998 168 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 SRSF2Q01130 221 aaKnown RBP8.78□□□□□ -1
VPS13D-210ENST00000489961 HERPUD1Q15011 391 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 IGSF11Q5DX21 431 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 CNIH2Q6PI25 160 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 SNX29P2Q8IUI4 249 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 OR8H3Q8N146 312 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 LYG1Q8N1E2 194 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 GVQW1Q8N7I0 195 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 BEST4Q8NFU0 473 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 DIRAS2Q96HU8 199 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 NXF2Q9GZY0 626 aaKnown RBP8.78□□□□□ -1
VPS13D-210ENST00000489961 MMP27Q9H306 513 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 GHITMQ9H3K2 345 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 SCPEP1Q9HB40 452 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 RDH8Q9NYR8 311 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 RABL2AQ9UBK7 228 aaPredicted RBP8.78□□□□□ -1
VPS13D-210ENST00000489961 ANXA10Q9UJ72 324 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 RABL2BQ9UNT1 228 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 A3GALT2U3KPV4 340 aa8.78□□□□□ -1
VPS13D-210ENST00000489961 MEIS3P1A6NDR6 274 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 SULT1C2O00338 296 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 TXNL1O43396 289 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 S100A5P33763 92 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 ZNF137PP52743 207 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 ZNF816Q0VGE8 651 aaPredicted RBP8.77□□□□□ -1.01
VPS13D-210ENST00000489961 C16orf87Q6PH81 154 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 FAM216AQ8WUB2 273 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 TMEM158Q8WZ71 300 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 GCDHQ92947 438 aaPredicted RBP8.77□□□□□ -1.01
VPS13D-210ENST00000489961 CHIAQ9BZP6 476 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 TOLLIPQ9H0E2 274 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 PIPOXQ9P0Z9 390 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 PITPNC1Q9UKF7 332 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 VPREB3Q9UKI3 123 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 JMJD1CQ15652 2540 aa8.77□□□□□ -1.01
VPS13D-210ENST00000489961 A0A1W2PPI3 338 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 RAB29O14966 203 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 ST8SIA5O15466 376 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 LANCL1O43813 399 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 CRYBA1P05813 215 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 REG1BP48304 166 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 RAB13P51153 203 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 RPL15P61313 204 aaKnown RBP8.76□□□□□ -1.01
VPS13D-210ENST00000489961 DIAPH2-AS1Q14236 149 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 LY6EQ16553 131 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 PYHIN1Q6K0P9 492 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 FAM71F2Q6NXP2 309 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 LIAT1Q6ZQX7 453 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 MOB3BQ86TA1 216 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 TGIF2LXQ8IUE1 241 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 H1FOOQ8IZA3 346 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-210ENST00000489961 OR5AP2Q8NGF4 316 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 GPX8Q8TED1 209 aa8.76□□□□□ -1.01
VPS13D-210ENST00000489961 RTN4IP1Q8WWV3 396 aaPredicted RBP8.76□□□□□ -1.01
VPS13D-210ENST00000489961 ST6GALNAC6Q969X2 333 aa8.76□□□□□ -1.01
Retrieved 100 of 20,778 RNA–protein pairs in 34.1 ms