RNA–Protein interactions for RNA: ENST00000489868.5

CCDC39-206, Transcript of coiled-coil domain containing 39, humanhuman

TSL 3

Gene CCDC39, Length 534 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC39-206ENST00000489868 SLC35F6Q8N357 371 aa1.08□□□□□ -2.24
CCDC39-206ENST00000489868 RETNLBQ9BQ08 111 aa1.08□□□□□ -2.24
CCDC39-206ENST00000489868 METTL8Q9H825 291 aaKnown RBP1.08□□□□□ -2.24
CCDC39-206ENST00000489868 DMAC2Q9NW81 257 aa1.08□□□□□ -2.24
CCDC39-206ENST00000489868 ABCB11O95342 1321 aa1.08□□□□□ -2.24
CCDC39-206ENST00000489868 TNIKQ9UKE5 1360 aa1.08□□□□□ -2.24
CCDC39-206ENST00000489868 MUC16Q8WXI7 14507 aa1.07□□□□□ -2.24
CCDC39-206ENST00000489868 DHRS12A0PJE2 317 aa1.07□□□□□ -2.24
CCDC39-206ENST00000489868 A8MUN3 132 aa1.07□□□□□ -2.24
CCDC39-206ENST00000489868 CARD18P57730 90 aa1.07□□□□□ -2.24
CCDC39-206ENST00000489868 CENPWQ5EE01 88 aa1.07□□□□□ -2.24
CCDC39-206ENST00000489868 GLT6D1Q7Z4J2 308 aa1.07□□□□□ -2.24
CCDC39-206ENST00000489868 NAA38Q9BRA0 125 aaKnown RBP1.07□□□□□ -2.24
CCDC39-206ENST00000489868 FIS1Q9Y3D6 152 aa1.07□□□□□ -2.24
CCDC39-206ENST00000489868 IGHV3-15A0A0B4J1V0 119 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 MDFIC2A0A1B0GVS7 189 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 GPR171O14626 319 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 CCNOP22674 350 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 SULT1A2P50226 295 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 Q6ZTI0 123 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 TMEM75Q8N9X5 138 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 OR4P4Q8NGL7 312 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 MRPS24Q96EL2 167 aaKnown RBP1.06□□□□□ -2.24
CCDC39-206ENST00000489868 DOK5Q9P104 306 aa1.06□□□□□ -2.24
CCDC39-206ENST00000489868 A0A1B0GX12 115 aa1.05□□□□□ -2.24
CCDC39-206ENST00000489868 RAB19A4D1S5 217 aa1.05□□□□□ -2.24
CCDC39-206ENST00000489868 ORM2P19652 201 aa1.05□□□□□ -2.24
CCDC39-206ENST00000489868 ACTR1BP42025 376 aa1.05□□□□□ -2.24
CCDC39-206ENST00000489868 PSMB3P49720 205 aa1.05□□□□□ -2.24
CCDC39-206ENST00000489868 FGF12P61328 243 aa1.05□□□□□ -2.24
CCDC39-206ENST00000489868 TRMT12Q53H54 448 aaKnown RBP1.05□□□□□ -2.24
CCDC39-206ENST00000489868 FAM201AQ5SY85 155 aa1.05□□□□□ -2.24
CCDC39-206ENST00000489868 CCDC88CQ9P219 2028 aa1.05□□□□□ -2.24
CCDC39-206ENST00000489868 GOLGA8IPA6NC78 632 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 CRXO43186 299 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-206ENST00000489868 ZNF705DP0CH99 300 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-206ENST00000489868 ZNF705BP0CI00 300 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-206ENST00000489868 CCL3P10147 92 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 CRHBPP24387 322 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 GADD45AP24522 165 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 LINC00313P59037 77 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 ACTBP60709 375 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 ACTG1P63261 375 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 UAP1Q16222 522 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-206ENST00000489868 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.04□□□□□ -2.24
CCDC39-206ENST00000489868 MTERF4Q7Z6M4 381 aaKnown RBP1.04□□□□□ -2.24
CCDC39-206ENST00000489868 IFT81Q8WYA0 676 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 FGF13Q92913 245 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 GOLPH3Q9H4A6 298 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 ALG5Q9Y673 324 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 KDM5BQ9UGL1 1544 aa1.04□□□□□ -2.24
CCDC39-206ENST00000489868 ZFHX2Q9C0A1 2572 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-206ENST00000489868 SCN9AQ15858 1988 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 ZNF705FA8MVS1 300 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-206ENST00000489868 CDK2P24941 298 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 MAGEA12P43365 314 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 RAP1GDS1P52306 607 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 PRB3Q04118 309 aaPredicted RBP1.03□□□□□ -2.24
CCDC39-206ENST00000489868 MRPL52Q86TS9 123 aaKnown RBP1.03□□□□□ -2.24
CCDC39-206ENST00000489868 FNDC9Q8TBE3 224 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 MED18Q9BUE0 208 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 MND1Q9BWT6 205 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 CHST5Q9GZS9 411 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 MRM2Q9UI43 246 aaKnown RBP1.03□□□□□ -2.24
CCDC39-206ENST00000489868 ENPP5Q9UJA9 477 aa1.03□□□□□ -2.24
CCDC39-206ENST00000489868 LINC00862A6NCI5 91 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 EFCAB9A8MZ26 197 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 UBFD1O14562 309 aaKnown RBP1.02□□□□□ -2.25
CCDC39-206ENST00000489868 ZW10O43264 779 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 CST4P01036 141 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 ATF1P18846 271 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 CRYBB3P26998 211 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 SERPINB10P48595 397 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 RPL14P50914 215 aaKnown RBP1.02□□□□□ -2.25
CCDC39-206ENST00000489868 ZNF90Q03938 601 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 XKRXQ6PP77 449 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 C10orf105Q8TEF2 133 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 TMEM239Q8WW34 195 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 TRNT1Q96Q11 434 aaKnown RBP1.02□□□□□ -2.25
CCDC39-206ENST00000489868 TMEM216Q9P0N5 145 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 SNX12Q9UMY4 172 aa1.02□□□□□ -2.25
CCDC39-206ENST00000489868 TMEM235A6NFC5 223 aa1.01□□□□□ -2.25
CCDC39-206ENST00000489868 ZNF728P0DKX0 622 aa1.01□□□□□ -2.25
CCDC39-206ENST00000489868 CCL2P13500 99 aa1.01□□□□□ -2.25
CCDC39-206ENST00000489868 TNNC1P63316 161 aa1.01□□□□□ -2.25
CCDC39-206ENST00000489868 ST13P4Q8IZP2 240 aaPredicted RBP1.01□□□□□ -2.25
CCDC39-206ENST00000489868 C10orf126Q8N4M7 172 aa1.01□□□□□ -2.25
CCDC39-206ENST00000489868 LINC00527Q9UJ94 153 aa1.01□□□□□ -2.25
CCDC39-206ENST00000489868 POFUT2Q9Y2G5 429 aa1.01□□□□□ -2.25
CCDC39-206ENST00000489868 ZNF532Q9HCE3 1301 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 TMSB15BA0A087X1C1 80 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 OR5K4A6NMS3 321 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 SGCEO43556 437 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 NPPCP23582 126 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 RCVRNP35243 200 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 OR1E2P47887 323 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 DAPP51397 102 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 RAB31Q13636 194 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 OR5K1Q8NHB7 308 aa1□□□□□ -2.25
CCDC39-206ENST00000489868 TAMM41Q96BW9 452 aa1□□□□□ -2.25
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms