RNA–Protein interactions for RNA: ENST00000489728.1

CPSF7-212, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 4

Gene CPSF7, Length 488 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-212ENST00000489728 UBALD1Q8TB05 177 aa8.92□□□□□ -0.98
CPSF7-212ENST00000489728 S100A16Q96FQ6 103 aaKnown RBP8.92□□□□□ -0.98
CPSF7-212ENST00000489728 CYYR1Q96J86 154 aa8.92□□□□□ -0.98
CPSF7-212ENST00000489728 AKR1E2Q96JD6 320 aa8.92□□□□□ -0.98
CPSF7-212ENST00000489728 NAA50Q9GZZ1 169 aaKnown RBP8.92□□□□□ -0.98
CPSF7-212ENST00000489728 TOLLIPQ9H0E2 274 aa8.92□□□□□ -0.98
CPSF7-212ENST00000489728 C1RLQ9NZP8 487 aa8.92□□□□□ -0.98
CPSF7-212ENST00000489728 A0A075B6Q4 140 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 IGHV3-43A0A0B4J1X8 118 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 A0A1W2PPI3 338 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 FAM90A9PA6NNJ1 464 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 FABP7O15540 132 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 XRCC3O43542 346 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 TSPAN9O75954 239 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 APOA1P02647 267 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 FAM106CPP0CH98 169 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 IGHV3-43DP0DP04 118 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 ZNF182P17025 639 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-212ENST00000489728 SOX6P35712 828 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 PPP1CCP36873 323 aaKnown RBP8.91□□□□□ -0.98
CPSF7-212ENST00000489728 RAG2P55895 527 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 GNG2P59768 71 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 GNMTQ14749 295 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 MZT2AQ6P582 158 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 C11orf88Q6PI97 169 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 CLVS1Q8IUQ0 354 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-212ENST00000489728 IZUMO1Q8IYV9 350 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 SAMD12Q8N8I0 201 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 OR52L2PQ8NGH6 319 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 OR10V1Q8NGI7 309 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 RTN4IP1Q8WWV3 396 aaPredicted RBP8.91□□□□□ -0.98
CPSF7-212ENST00000489728 IL1F10Q8WWZ1 152 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 NPFFR1Q9GZQ6 430 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 C16orf95Q9H693 158 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 BEX1Q9HBH7 125 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 TNFRSF19Q9NS68 423 aa8.91□□□□□ -0.98
CPSF7-212ENST00000489728 TRAV18A0A075B6X5 111 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 IGHV1-3A0A0C4DH29 117 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 M0QZK8 103 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 HSPA12AO43301 675 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 TPPPO94811 219 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 IGHV3-7P01780 117 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 SCTP09683 121 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 CTXN2P0C2S0 81 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 CBX5P45973 191 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 ZNF134P52741 427 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 TGIF2LXQ8IUE1 241 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 OR4C13Q8NGP0 309 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 CFHR4Q92496 578 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 AUNIPQ9H7T9 357 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 CCDC59Q9P031 241 aaKnown RBP8.9□□□□□ -0.98
CPSF7-212ENST00000489728 PIPOXQ9P0Z9 390 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 SLC23A1Q9UHI7 598 aa8.9□□□□□ -0.98
CPSF7-212ENST00000489728 TRBV6-7A0A0A0MS04 114 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 A0A1W2PPE3 182 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 TMEM235A6NFC5 223 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 TIMM23O14925 209 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 RAB29O14966 203 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 SLC31A2O15432 143 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 CHST1O43916 411 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 OR2F2O95006 317 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 PAX6P26367 422 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 CD1BP29016 333 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 RELBQ01201 579 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 EBI3Q14213 229 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 HERPUD1Q15011 391 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 LY6EQ16553 131 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 PLA1AQ53H76 456 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 AWAT1Q58HT5 328 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 TMEM69Q5SWH9 247 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 C12orf54Q6X4T0 127 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 ZNF833PQ6ZTB9 187 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 LYG1Q8N1E2 194 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 Q8N2B8 174 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 ZNF436-AS1Q8NC38 126 aaPredicted RBP8.89□□□□□ -0.99
CPSF7-212ENST00000489728 OR10J5Q8NHC4 309 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 NUDCD2Q8WVJ2 157 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 CAPSLQ8WWF8 208 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 ISOC1Q96CN7 298 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 RBM14Q96PK6 669 aaKnown RBP8.89□□□□□ -0.99
CPSF7-212ENST00000489728 AGMATQ9BSE5 352 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 IFI27L2Q9H2X8 130 aa8.89□□□□□ -0.99
CPSF7-212ENST00000489728 IGKV1-6A0A0C4DH72 117 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 SMIM31A0A1B0GVY4 71 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 CLPSL1A2RUU4 121 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 ZNF701M0R085 212 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-212ENST00000489728 SSX5O60225 188 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 CEACAM6P40199 344 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 RAB13P51153 203 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 FAM53AQ6NSI3 398 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-212ENST00000489728 CNIH2Q6PI25 160 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 CCBE1Q6UXH8 406 aaPredicted RBP8.88□□□□□ -0.99
CPSF7-212ENST00000489728 Q6ZSV7 163 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 ODF3L1Q8IXM7 274 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 DRAM1Q8N682 238 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 OR8H1Q8NGG4 311 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 OR56B4Q8NH76 319 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 C15orf40Q8WUR7 153 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 S1PR3Q99500 378 aa8.88□□□□□ -0.99
CPSF7-212ENST00000489728 OR1A1Q9P1Q5 309 aa8.88□□□□□ -0.99
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms