RNA–Protein interactions for RNA: ENST00000489540.1

MDC1-206, Transcript of mediator of DNA damage checkpoint 1, humanhuman

TSL 2

Gene MDC1, Length 1,402 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDC1-206ENST00000489540 TRDCB7Z8K6 153 aa13.88□□□□□ -0.19
MDC1-206ENST00000489540 MFNGO00587 321 aa13.88□□□□□ -0.19
MDC1-206ENST00000489540 SNRNP70P08621 437 aaKnown RBP13.88□□□□□ -0.19
MDC1-206ENST00000489540 SNRPBP14678 240 aaKnown RBP13.88□□□□□ -0.19
MDC1-206ENST00000489540 GNB3P16520 340 aa13.88□□□□□ -0.19
MDC1-206ENST00000489540 REG1BP48304 166 aa13.88□□□□□ -0.19
MDC1-206ENST00000489540 BLCAPP62952 87 aa13.88□□□□□ -0.19
MDC1-206ENST00000489540 HLA-DRB3P79483 266 aa13.88□□□□□ -0.19
MDC1-206ENST00000489540 HABP2Q14520 560 aaPredicted RBP13.88□□□□□ -0.19
MDC1-206ENST00000489540 IDNKQ5T6J7 187 aa13.88□□□□□ -0.19
MDC1-206ENST00000489540 RTN4IP1Q8WWV3 396 aaPredicted RBP13.88□□□□□ -0.19
MDC1-206ENST00000489540 TENM1Q9UKZ4 2725 aa13.87□□□□□ -0.19
MDC1-206ENST00000489540 LANCL1O43813 399 aa13.87□□□□□ -0.19
MDC1-206ENST00000489540 ZBTB25P24278 435 aa13.87□□□□□ -0.19
MDC1-206ENST00000489540 HES1Q14469 280 aa13.87□□□□□ -0.19
MDC1-206ENST00000489540 TGIF2LXQ8IUE1 241 aa13.87□□□□□ -0.19
MDC1-206ENST00000489540 LYG1Q8N1E2 194 aa13.87□□□□□ -0.19
MDC1-206ENST00000489540 OR2AK2Q8NG84 335 aa13.87□□□□□ -0.19
MDC1-206ENST00000489540 ETV7Q9Y603 341 aa13.87□□□□□ -0.19
MDC1-206ENST00000489540 A0A075B6Q4 140 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 SCTP09683 121 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 TMEM11P17152 192 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 CD1BP29016 333 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 TALDO1P37837 337 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 KRTAP10-3P60369 221 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 SRSF4Q08170 494 aaKnown RBP13.86□□□□□ -0.19
MDC1-206ENST00000489540 EBI3Q14213 229 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 KIR2DS1Q14954 304 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 CDNFQ49AH0 187 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 OR13F1Q8NGS4 319 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 LGALS14Q8TCE9 139 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 GHITMQ9H3K2 345 aa13.86□□□□□ -0.19
MDC1-206ENST00000489540 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.86□□□□□ -0.19
MDC1-206ENST00000489540 ITGB1BP1O14713 200 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 HSPA12AO43301 675 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 IGKV1D-33P01593 117 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 IGKV1-33P01594 117 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 FCGR3AP08637 254 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 CEACAM6P40199 344 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 LSM3P62310 102 aaKnown RBP13.85□□□□□ -0.19
MDC1-206ENST00000489540 ARFRP1Q13795 201 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 SRSF7Q16629 238 aaKnown RBP eCLIP13.85□□□□□ -0.19
MDC1-206ENST00000489540 IZUMO1Q8IYV9 350 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 OR4A4PQ8NGN8 299 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 PHF21AQ96BD5 680 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 FUNDC2Q9BWH2 189 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 RHBDL2Q9NX52 303 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 SLC23A1Q9UHI7 598 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 MOB4Q9Y3A3 225 aa13.85□□□□□ -0.19
MDC1-206ENST00000489540 SMIM18P0DKX4 95 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 RPS19P39019 145 aaKnown RBP13.84□□□□□ -0.19
MDC1-206ENST00000489540 SERPINB10P48595 397 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 HNF4GQ14541 408 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 FBLN7Q53RD9 439 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 ARSJQ5FYB0 599 aaPredicted RBP13.84□□□□□ -0.19
MDC1-206ENST00000489540 OR2T10Q8NGZ9 312 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 EDARADDQ8WWZ3 215 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 SERTAD4Q9NUC0 356 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 PIPOXQ9P0Z9 390 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 SPATA2Q9UM82 520 aa13.84□□□□□ -0.19
MDC1-206ENST00000489540 IGHV3-72A0A0B4J1Y9 119 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 RAB29O14966 203 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 FABP7O15540 132 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 DIRAS3O95661 229 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 GSTP1P09211 210 aaKnown RBP13.83□□□□□ -0.2
MDC1-206ENST00000489540 DTYMKP23919 212 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 TGFBR1P36897 503 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 PITPNAQ00169 270 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 HERPUD1Q15011 391 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 ABCA11PQ4W5N1 156 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 HACD4Q5VWC8 232 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 Q6ZS46 218 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 ODF3L1Q8IXM7 274 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 KLHDC1Q8N7A1 406 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 OR5H6Q8NGV6 325 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 EAF1Q96JC9 268 aaPredicted RBP13.83□□□□□ -0.2
MDC1-206ENST00000489540 MRPS26Q9BYN8 205 aaKnown RBP13.83□□□□□ -0.2
MDC1-206ENST00000489540 OR1A1Q9P1Q5 309 aa13.83□□□□□ -0.2
MDC1-206ENST00000489540 A0A0A6YYH2 397 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 A6NJ64 397 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 FGF16O43320 207 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 PEX14O75381 377 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 MOSP00540 346 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 AMY1AP04745 511 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 AMY2AP04746 511 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 VSIG10L2P0DP72 767 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 VDAC2P45880 294 aaPredicted RBP13.82□□□□□ -0.2
MDC1-206ENST00000489540 PNLIPRP3Q17RR3 467 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 PRR31Q5SQ13 230 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 FAM71F2Q6NXP2 309 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 Q6ZS49 121 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 ZNF833PQ6ZTB9 187 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 S1PR3Q99500 378 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 C11orf54Q9H0W9 315 aaPredicted RBP13.82□□□□□ -0.2
MDC1-206ENST00000489540 IFI27L2Q9H2X8 130 aa13.82□□□□□ -0.2
MDC1-206ENST00000489540 IGKV1-6A0A0C4DH72 117 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 ST8SIA5O15466 376 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 ZNF260Q3ZCT1 412 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 OR8H1Q8NGG4 311 aa13.81□□□□□ -0.2
MDC1-206ENST00000489540 SLC25A46Q96AG3 418 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 50.3 ms