RNA–Protein interactions for RNA: ENST00000489142.5

VTI1A-206, Transcript of vesicle transport through interaction with t-SNAREs 1A, humanhuman

TSL 2

Gene VTI1A, Length 727 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VTI1A-206ENST00000489142 HSPA13P48723 471 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 RPL23AP62750 156 aaKnown RBP11.05□□□□□ -0.64
VTI1A-206ENST00000489142 LSAMPQ13449 338 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 SSX1Q16384 188 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 HES5Q5TA89 166 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 FOXRED2Q8IWF2 684 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 OR51D1Q8NGF3 324 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 CHPT1Q8WUD6 406 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 GALMQ96C23 342 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 RITA1Q96K30 269 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 S1PR3Q99500 378 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 HSPB9Q9BQS6 159 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 PARP12Q9H0J9 701 aaKnown RBP11.05□□□□□ -0.64
VTI1A-206ENST00000489142 ISYNA1Q9NPH2 558 aa11.05□□□□□ -0.64
VTI1A-206ENST00000489142 SAA2-SAA4A0A096LPE2 208 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 NUDT19A8MXV4 375 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 TXNL1O43396 289 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 LANCL1O43813 399 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 ARL6IP5O75915 188 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 ATP6V1G2O95670 118 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 NAPSAO96009 420 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 SAA2P0DJI9 122 aaPredicted RBP11.04□□□□□ -0.64
VTI1A-206ENST00000489142 CNTFRP26992 372 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 VEGFCP49767 419 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 HTD2P86397 168 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 TRAM1Q15629 374 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 TBCEQ15813 527 aaPredicted RBP11.04□□□□□ -0.64
VTI1A-206ENST00000489142 FOXB2Q5VYV0 432 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 ETV3LQ6ZN32 361 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 C8orf86Q6ZUL3 223 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 DUX3Q96PT4 197 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 RASL11BQ9BPW5 248 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 ABCG5Q9H222 651 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 LIN7CQ9NUP9 197 aaKnown RBP11.04□□□□□ -0.64
VTI1A-206ENST00000489142 ABRACLQ9P1F3 81 aa11.04□□□□□ -0.64
VTI1A-206ENST00000489142 SHISA3A0PJX4 238 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 YPEL1O60688 119 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 PSMA1P25786 263 aaKnown RBP11.03□□□□□ -0.64
VTI1A-206ENST00000489142 OR10A3P58181 314 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 RPL39P5Q59GN2 51 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 ZNF367Q7RTV3 350 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 OR2W3Q7Z3T1 314 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 ZNF554Q86TJ5 538 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 FAM71E2Q8N5Q1 922 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 KLHL30-AS1Q8NEE0 82 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 OR2AK2Q8NG84 335 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 FAM3DQ96BQ1 224 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 ARHGAP5-AS1Q96IT6 56 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 YPEL2Q96QA6 119 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 NABP2Q9BQ15 211 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 URM1Q9BTM9 101 aaKnown RBP11.03□□□□□ -0.64
VTI1A-206ENST00000489142 IFI27L2Q9H2X8 130 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 ACOT13Q9NPJ3 140 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 AURKAIP1Q9NWT8 199 aaPredicted RBP11.03□□□□□ -0.64
VTI1A-206ENST00000489142 OR1A1Q9P1Q5 309 aa11.03□□□□□ -0.64
VTI1A-206ENST00000489142 TMEM272A0A1B0GTI8 110 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 SMIM30A4D0T7 59 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 FOXI3A8MTJ6 420 aaPredicted RBP11.02□□□□□ -0.65
VTI1A-206ENST00000489142 AP4M1O00189 453 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 RGS11O94810 467 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 RPLP1P05386 114 aaKnown RBP11.02□□□□□ -0.65
VTI1A-206ENST00000489142 TMEM50BP56557 158 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 SLC35B1P78383 322 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 MMDQ15546 238 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 C2orf76Q3KRA6 126 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 STEAP3Q658P3 488 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 ZNF880Q6PDB4 577 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 GLDNQ6ZMI3 551 aaPredicted RBP11.02□□□□□ -0.65
VTI1A-206ENST00000489142 ZNF833PQ6ZTB9 187 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 LINC00482Q8N8I6 264 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 WFDC9Q8NEX5 89 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 PECRQ9BY49 303 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 NECAP2Q9NVZ3 263 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 STEAP1Q9UHE8 339 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 SLC23A1Q9UHI7 598 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 BLOC1S6Q9UL45 172 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 RAB26Q9ULW5 256 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 V9GY05 133 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 DNAH3Q8TD57 4116 aa11.02□□□□□ -0.65
VTI1A-206ENST00000489142 A0A0B4J203 849 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 SCTP09683 121 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 SOX6P35712 828 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 ACTBP60709 375 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 HLA-DRB3P79483 266 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 DEFB136Q30KP8 78 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 MOGAT2Q3SYC2 334 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 PLAC9Q5JTB6 97 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 FAM131AQ6UXB0 335 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 MOB1BQ7L9L4 216 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 MRPL41Q8IXM3 137 aaKnown RBP11.01□□□□□ -0.65
VTI1A-206ENST00000489142 FAM89BQ8N5H3 189 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 MRAPQ8TCY5 172 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 ABHD14BQ96IU4 210 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 NDUFB11Q9NX14 153 aa11.01□□□□□ -0.65
VTI1A-206ENST00000489142 LDLRAD4O15165 306 aa11□□□□□ -0.65
VTI1A-206ENST00000489142 DENRO43583 198 aaKnown RBP11□□□□□ -0.65
VTI1A-206ENST00000489142 HOXD3P31249 432 aaPredicted RBP11□□□□□ -0.65
VTI1A-206ENST00000489142 THBS3P49746 956 aa11□□□□□ -0.65
VTI1A-206ENST00000489142 TEX38Q6PEX7 206 aa11□□□□□ -0.65
VTI1A-206ENST00000489142 CMSS1Q9BQ75 279 aaKnown RBP11□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms