RNA–Protein interactions for RNA: ENST00000488384.1

ERGIC3-216, Transcript of ERGIC and golgi 3, humanhuman

TSL 2

Gene ERGIC3, Length 766 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERGIC3-216ENST00000488384 ELF5Q9UKW6 265 aaPredicted RBP12.81□□□□□ -0.36
ERGIC3-216ENST00000488384 IGHV1-3A0A0C4DH29 117 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 IGKV1-6A0A0C4DH72 117 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 HAX1O00165 279 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 RGS11O94810 467 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 GAPDHP04406 335 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 SNRNP70P08621 437 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 SCTP09683 121 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 KIR2DS4P43632 304 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 ALDH3B2P48448 385 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 VBP1P61758 197 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 MRPS15P82914 257 aaKnown RBP12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 CROCCP3Q8IVE0 287 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 ODF3L1Q8IXM7 274 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 CAPSLQ8WWF8 208 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 SLC25A33Q9BSK2 321 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 IFI27L2Q9H2X8 130 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 OR1A1Q9P1Q5 309 aa12.8□□□□□ -0.36
ERGIC3-216ENST00000488384 TRDCB7Z8K6 153 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 TMEM127O75204 238 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 SCGNO76038 276 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 OR2F2O95006 317 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 GABARAPO95166 117 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 TFAP2AP05549 437 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 SERPINB10P48595 397 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 KRTAP10-3P60369 221 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 SRSF4Q08170 494 aaKnown RBP12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 ARFRP1Q13795 201 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 HERPUD1Q15011 391 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 ARL6IP1Q15041 203 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 SHISA2Q6UWI4 295 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 C16orf82Q7Z2V1 217 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 THNSL2Q86YJ6 484 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 IZUMO1Q8IYV9 350 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 LYG1Q8N1E2 194 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 Q8N2B8 174 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 OR2AK2Q8NG84 335 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 MAFIPQ8WZ33 124 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 SLC25A46Q96AG3 418 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 RBM14Q96PK6 669 aaKnown RBP12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 SLC23A1Q9UHI7 598 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 SPATA2Q9UM82 520 aa12.79□□□□□ -0.36
ERGIC3-216ENST00000488384 IGHV3-72A0A0B4J1Y9 119 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 TMEM235A6NFC5 223 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 FABP7O15540 132 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 IGKV1D-33P01593 117 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 IGKV1-33P01594 117 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 GSTP1P09211 210 aaKnown RBP12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 FAM106CPP0CH98 169 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 BLCAPP62952 87 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 CTF1Q16619 201 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 CDNFQ49AH0 187 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 HACD4Q5VWC8 232 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 Q6ZS46 218 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 MOB3BQ86TA1 216 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 ANKRD13BQ86YJ7 626 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 TGIF2LXQ8IUE1 241 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 OR2T6Q8NHC8 308 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 CABLES2Q9BTV7 478 aa12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 ZNF230Q9UIE0 474 aaPredicted RBP12.78□□□□□ -0.36
ERGIC3-216ENST00000488384 IGKV1D-8A0A087WSZ0 117 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 SAA2-SAA4A0A096LPE2 208 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 ST8SIA5O15466 376 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 TXNL1O43396 289 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 LANCL1O43813 399 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 AMY1AP04745 511 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 AMY2AP04746 511 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 SAA2P0DJI9 122 aaPredicted RBP12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 ZBTB25P24278 435 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 KIR2DS1Q14954 304 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 ZNF260Q3ZCT1 412 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 GPR107Q5VW38 600 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 ZNF833PQ6ZTB9 187 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 OR4A4PQ8NGN8 299 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 NUDCD2Q8WVJ2 157 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 AKR1E2Q96JD6 320 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 SERTAD4Q9NUC0 356 aa12.77□□□□□ -0.37
ERGIC3-216ENST00000488384 ZNF736B4DX44 427 aaPredicted RBP12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 ITGB1BP1O14713 200 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 HSPA12AO43301 675 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 SSX5O60225 188 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 LPLP06858 475 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 GSTT2P0CG29 244 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 GSTT2BP0CG30 244 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 TMEM11P17152 192 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 DTYMKP23919 212 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 OR3A3P47888 321 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 EBI3Q14213 229 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 HES1Q14469 280 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 SRSF7Q16629 238 aaKnown RBP eCLIP12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 TMEM95Q3KNT9 176 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 IGSF11Q5DX21 431 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 Q6ZS49 121 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 GPR141Q7Z602 305 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 Q8N6K4 173 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 CITED1Q99966 193 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 AGMATQ9BSE5 352 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 MRPL20Q9BYC9 149 aaKnown RBP12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 PRSS22Q9GZN4 317 aa12.76□□□□□ -0.37
ERGIC3-216ENST00000488384 C11orf54Q9H0W9 315 aaPredicted RBP12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 40.9 ms