RNA–Protein interactions for RNA: ENST00000487984.1

SDC3-204, Transcript of syndecan 3, humanhuman

TSL 3

Gene SDC3, Length 355 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDC3-204ENST00000487984 PEX16Q9Y5Y5 336 aa9.71□□□□□ -0.86
SDC3-204ENST00000487984 FAM90A10PA6NDY2 464 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 FAM90A7PA6NKC0 464 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 LINC01548A6NM66 108 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 NCBP2LA6PVI3 153 aaKnown RBP9.7□□□□□ -0.86
SDC3-204ENST00000487984 FAM90A23PA8MXZ1 464 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 SPINT2O43291 252 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 CRTAPO75718 401 aaPredicted RBP9.7□□□□□ -0.86
SDC3-204ENST00000487984 HBZP02008 142 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 SRMP19623 302 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 RAB3BP20337 219 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 IL3RAP26951 378 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 SDC2P34741 201 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 ZNF134P52741 427 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 C6orf183Q5T699 404 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 SIGIRRQ6IA17 410 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 SLC25A48Q6ZT89 311 aaKnown RBP9.7□□□□□ -0.86
SDC3-204ENST00000487984 C18orf65Q6ZTR6 163 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 OR2W3Q7Z3T1 314 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 TGIF2LXQ8IUE1 241 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 MRPL41Q8IXM3 137 aaKnown RBP9.7□□□□□ -0.86
SDC3-204ENST00000487984 STPG2Q8N412 459 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 PRR18Q8N4B5 295 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 NKAIN3Q8N8D7 197 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 ZNF439Q8NDP4 499 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 OR10V1Q8NGI7 309 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 OR2T10Q8NGZ9 312 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 OR1L1Q8NH94 360 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 Q96M66 194 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 GNG12Q9UBI6 72 aa9.7□□□□□ -0.86
SDC3-204ENST00000487984 UBE2QL1A1L167 161 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 ZNF736B4DX44 427 aaPredicted RBP9.69□□□□□ -0.86
SDC3-204ENST00000487984 MPIG6BO95866 241 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 MOSP00540 346 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 ZNF182P17025 639 aaPredicted RBP9.69□□□□□ -0.86
SDC3-204ENST00000487984 RCC1P18754 421 aaPredicted RBP9.69□□□□□ -0.86
SDC3-204ENST00000487984 FUT3P21217 361 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 CD1BP29016 333 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 GPR12P47775 334 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 ZNF137PP52743 207 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 KRTAP10-11P60412 298 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 INSL4Q14641 139 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 TMEM30BQ3MIR4 351 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 CT45A1Q5HYN5 189 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 FOXRED2Q8IWF2 684 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 Q8N9W7 124 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 OR51D1Q8NGF3 324 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 CT45A3Q8NHU0 189 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 DYNC2LI1Q8TCX1 351 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 FAM46BQ96A09 425 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 SLC25A46Q96AG3 418 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 RBMXL1Q96E39 390 aaKnown RBP9.69□□□□□ -0.86
SDC3-204ENST00000487984 UQCC2Q9BRT2 126 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 ABCG5Q9H222 651 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 RNF167Q9H6Y7 350 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 RAB9BQ9NP90 201 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 PLSCR3Q9NRY6 295 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 LIN7CQ9NUP9 197 aaKnown RBP9.69□□□□□ -0.86
SDC3-204ENST00000487984 A3GALT2U3KPV4 340 aa9.69□□□□□ -0.86
SDC3-204ENST00000487984 NOTOA8MTQ0 251 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 NUDT19A8MXV4 375 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 K7EIL1 84 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 TXNL1O43396 289 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 PDCD6O75340 191 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 CA11O75493 328 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 DUS4LO95620 317 aaKnown RBP9.68□□□□□ -0.86
SDC3-204ENST00000487984 GLAP06280 429 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 RPS19P39019 145 aaKnown RBP9.68□□□□□ -0.86
SDC3-204ENST00000487984 THBS3P49746 956 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 SLC35B1P78383 322 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 MXD1Q05195 221 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 FAM27D1Q5T7N8 215 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 GLT8D1Q68CQ7 371 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 MZT2AQ6P582 158 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 TRAT1Q6PIZ9 186 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 C8orf86Q6ZUL3 223 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 COMMD1Q8N668 190 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 KCTD12Q96CX2 325 aaKnown RBP9.68□□□□□ -0.86
SDC3-204ENST00000487984 S1PR3Q99500 378 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 TAF9BQ9HBM6 251 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 ZFP57Q9NU63 452 aa9.68□□□□□ -0.86
SDC3-204ENST00000487984 MBNL3Q9NUK0 354 aaKnown RBP9.68□□□□□ -0.86
SDC3-204ENST00000487984 AP4M1O00189 453 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 HOXD3P31249 432 aaPredicted RBP9.67□□□□□ -0.86
SDC3-204ENST00000487984 TGFBR1P36897 503 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 GNMTQ14749 295 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 NKAPLQ5M9Q1 402 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 LINC00299Q6ZSB3 139 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 C5orf24Q7Z6I8 188 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 LRRTM1Q86UE6 522 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 FAM71E2Q8N5Q1 922 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 KLHL30-AS1Q8NEE0 82 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 MCFD2Q8NI22 146 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 MRPL30Q8TCC3 161 aaKnown RBP9.67□□□□□ -0.86
SDC3-204ENST00000487984 ACOT12Q8WYK0 555 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 OR2S2Q9NQN1 319 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 GHRLQ9UBU3 117 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 V9GY05 133 aa9.67□□□□□ -0.86
SDC3-204ENST00000487984 A0A075B6Q4 140 aa9.66□□□□□ -0.86
SDC3-204ENST00000487984 WI2-2373I1.2A0A1W2PRP0 233 aa9.66□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms