RNA–Protein interactions for RNA: ENST00000486100.1

PRPF40A-209, Transcript of pre-mRNA processing factor 40 homolog A, humanhuman

TSL 4

Gene PRPF40A, Length 569 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF40A-209ENST00000486100 ABRACLQ9P1F3 81 aa14.54□□□□□ -0.08
PRPF40A-209ENST00000486100 LINC00527Q9UJ94 153 aa14.54□□□□□ -0.08
PRPF40A-209ENST00000486100 BLOC1S6Q9UL45 172 aa14.54□□□□□ -0.08
PRPF40A-209ENST00000486100 RAB26Q9ULW5 256 aa14.54□□□□□ -0.08
PRPF40A-209ENST00000486100 PF4P02776 101 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 CALRP27797 417 aaKnown RBP14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 RANBP1P43487 201 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 GPR12P47775 334 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 PSMD7P51665 324 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 TBCEQ15813 527 aaPredicted RBP14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 RAB11BQ15907 218 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 ZNF880Q6PDB4 577 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 ODF3L1Q8IXM7 274 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 STPG2Q8N412 459 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 COMMD1Q8N668 190 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 RASL11BQ9BPW5 248 aa14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 CHMP1AQ9HD42 196 aaPredicted RBP14.53□□□□□ -0.08
PRPF40A-209ENST00000486100 AP4M1O00189 453 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 SOCS1O15524 211 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 PLXNB1O43157 2135 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 F2RL1P55085 397 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 LSAMPQ13449 338 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 ZNF367Q7RTV3 350 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 SVOPQ8N4V2 548 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 OR51D1Q8NGF3 324 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 ZFP57Q9NU63 452 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 HSF4Q9ULV5 492 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 V9GY05 133 aa14.52□□□□□ -0.09
PRPF40A-209ENST00000486100 TRBV6-6A0A0A6YYG2 114 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 ATP6V1G2O95670 118 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 IGLL1P15814 213 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 TMEM50BP56557 158 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 RPL23AP62750 156 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 C2orf76Q3KRA6 126 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 Q6ZPA2 131 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 MOB1BQ7L9L4 216 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 REC114Q7Z4M0 266 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 FAM71E2Q8N5Q1 922 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 OR2AK2Q8NG84 335 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 SETD6Q8TBK2 473 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 IL1F10Q8WWZ1 152 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 FAM3DQ96BQ1 224 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 RBMXL1Q96E39 390 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 STEAP1Q9UHE8 339 aa14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 PRKDCP78527 4128 aaKnown RBP14.51□□□□□ -0.09
PRPF40A-209ENST00000486100 FOXI3A8MTJ6 420 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 PRB2P02812 416 aaPredicted RBP14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 CLDN12P56749 244 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 SSX1Q16384 188 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 PNLIPRP3Q17RR3 467 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 TEX38Q6PEX7 206 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 ZNF833PQ6ZTB9 187 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 PHF21AQ96BD5 680 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 NABP2Q9BQ15 211 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 GON7Q9BXV9 100 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 NECAP2Q9NVZ3 263 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 AK3Q9UIJ7 227 aa14.5□□□□□ -0.09
PRPF40A-209ENST00000486100 SLC6A1P30531 599 aa14.49□□□□□ -0.09
PRPF40A-209ENST00000486100 SOX6P35712 828 aa14.49□□□□□ -0.09
PRPF40A-209ENST00000486100 OR3A3P47888 321 aa14.49□□□□□ -0.09
PRPF40A-209ENST00000486100 VEGFCP49767 419 aa14.49□□□□□ -0.09
PRPF40A-209ENST00000486100 MRPL20Q9BYC9 149 aaKnown RBP14.49□□□□□ -0.09
PRPF40A-209ENST00000486100 PIPOXQ9P0Z9 390 aa14.49□□□□□ -0.09
PRPF40A-209ENST00000486100 MGAT4AQ9UM21 535 aa14.49□□□□□ -0.09
PRPF40A-209ENST00000486100 NOTCH3Q9UM47 2321 aa14.49□□□□□ -0.09
PRPF40A-209ENST00000486100 TGP01266 2768 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 SAA2-SAA4A0A096LPE2 208 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 TRAV1-2A0A0B4J238 106 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 PDCD5O14737 125 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 LDLRAD4O15165 306 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 MRPS14O60783 128 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 SAA2P0DJI9 122 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 FOXB2Q5VYV0 432 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 FAM71F2Q6NXP2 309 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 CD200R1LQ6Q8B3 271 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 OR56B1Q8NGI3 324 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 RCC1LQ96I51 464 aaKnown RBP14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 ARHGAP5-AS1Q96IT6 56 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 HSPB9Q9BQS6 159 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 HDHD3Q9BSH5 251 aaPredicted RBP14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 PECRQ9BY49 303 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 IFI27L2Q9H2X8 130 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 NDUFB11Q9NX14 153 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 SLC23A1Q9UHI7 598 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 RAB22AQ9UL26 194 aa14.48□□□□□ -0.09
PRPF40A-209ENST00000486100 TRDV1A0A1B0GX56 115 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 ITGB1BP1O14713 200 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 RAB29O14966 203 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 ST8SIA5O15466 376 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 DENRO43583 198 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 DUS4LO95620 317 aaKnown RBP14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 THBS3P49746 956 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 GABARAPL2P60520 117 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 ACTBP60709 375 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 MMDQ15546 238 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 HES5Q5TA89 166 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 LINC00482Q8N8I6 264 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 RITA1Q96K30 269 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 ZNF251Q9BRH9 671 aa14.47□□□□□ -0.09
PRPF40A-209ENST00000486100 GHITMQ9H3K2 345 aa14.47□□□□□ -0.09
Retrieved 100 of 20,778 RNA–protein pairs in 37.5 ms