RNA–Protein interactions for RNA: ENST00000483778.5

ATG4B-221, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 3

Gene ATG4B, Length 1,103 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-221ENST00000483778 CA11O75493 328 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 VDAC1P21796 283 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 MMDQ15546 238 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 TMEM30BQ3MIR4 351 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 TRAT1Q6PIZ9 186 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 C8orf59Q8N0T1 100 aaPredicted RBP14.02□□□□□ -0.17
ATG4B-221ENST00000483778 OR5M8Q8NGP6 311 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 C4orf3Q8WVX3 66 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 UQCC2Q9BRT2 126 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 NICN1Q9BSH3 213 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 KCNIP1Q9NZI2 227 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 FBXO7Q9Y3I1 522 aa14.02□□□□□ -0.17
ATG4B-221ENST00000483778 A0A0A6YYD4 124 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 IGHV7-81A0A0B4J1V7 117 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 SEC14L6B5MCN3 397 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 ATP6V0E1O15342 81 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 RRP9O43818 475 aaKnown RBP14.01□□□□□ -0.17
ATG4B-221ENST00000483778 YPEL1O60688 119 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 ECI1P42126 302 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 QRFPP83859 136 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 HTD2P86397 168 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 FHL3Q13643 280 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 C1orf100Q5SVJ3 147 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 ZNF833PQ6ZTB9 187 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 ZNF491Q8N8L2 437 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 OR11H1Q8NG94 326 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 YPEL2Q96QA6 119 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 ZNF251Q9BRH9 671 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 OR51J1Q9H342 316 aa14.01□□□□□ -0.17
ATG4B-221ENST00000483778 SAA2-SAA4A0A096LPE2 208 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 I3L521 148 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 MYL12BO14950 172 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 IGLV1-40P01703 118 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 SAA2P0DJI9 122 aaPredicted RBP14□□□□□ -0.17
ATG4B-221ENST00000483778 BLVRBP30043 206 aaPredicted RBP14□□□□□ -0.17
ATG4B-221ENST00000483778 GNB1P62873 340 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 GABPB1Q06547 395 aaPredicted RBP14□□□□□ -0.17
ATG4B-221ENST00000483778 UNC119Q13432 240 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 HMGN3Q15651 99 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 C9orf66Q5T8R8 295 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 OGFRL1Q5TC84 451 aaPredicted RBP14□□□□□ -0.17
ATG4B-221ENST00000483778 CASTOR1Q8WTX7 329 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 ASCL2Q99929 193 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 TMED9Q9BVK6 235 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 ALX4Q9H161 411 aaPredicted RBP14□□□□□ -0.17
ATG4B-221ENST00000483778 IFI27L2Q9H2X8 130 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 RAB9BQ9NP90 201 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 ZNF580Q9UK33 172 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 JPT1Q9UK76 154 aa14□□□□□ -0.17
ATG4B-221ENST00000483778 FCN1O00602 326 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 ST8SIA5O15466 376 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 SOX15O60248 233 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 RAMP3O60896 148 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 CD37P11049 281 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 RPS27AP62979 156 aaKnown RBP13.99□□□□□ -0.17
ATG4B-221ENST00000483778 NDPQ00604 133 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 C5orf64Q2M2E5 130 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 ZNF260Q3ZCT1 412 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 RPL39P5Q59GN2 51 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 GLDNQ6ZMI3 551 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-221ENST00000483778 ZNF554Q86TJ5 538 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 NKAIN3Q8N8D7 197 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 IL1F10Q8WWZ1 152 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 GALMQ96C23 342 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 WWC2-AS2Q96NR7 200 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 NEDD4LQ96PU5 975 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 GFI1Q99684 422 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 HDHD3Q9BSH5 251 aaPredicted RBP13.99□□□□□ -0.17
ATG4B-221ENST00000483778 PARP11Q9NR21 331 aa13.99□□□□□ -0.17
ATG4B-221ENST00000483778 LSM2Q9Y333 95 aaKnown RBP13.99□□□□□ -0.17
ATG4B-221ENST00000483778 STAB2Q8WWQ8 2551 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 PTGES3LE9PB15 166 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 NBR2O15453 112 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 NAPSAO96009 420 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 HLA-DRB1P01911 266 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 CDK1P06493 297 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 CT45A6P0DMU7 189 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 CT45A5P0DMU8 189 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 CT45A7P0DMV0 189 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 EGR2P11161 476 aaPredicted RBP13.98□□□□□ -0.17
ATG4B-221ENST00000483778 LINC00205P59089 165 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 C19orf54Q5BKX5 351 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 LY6G6FQ5SQ64 297 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 LIN54Q6MZP7 749 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 ZNF880Q6PDB4 577 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 FAM131AQ6UXB0 335 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 CEACAM19Q7Z692 300 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 NPBQ8NG41 125 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 OR1N2Q8NGR9 330 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 UBE2E2Q96LR5 201 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP13.98□□□□□ -0.17
ATG4B-221ENST00000483778 C8orf4Q9NR00 106 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 GHRLQ9UBU3 117 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 ERGIC3Q9Y282 383 aa13.98□□□□□ -0.17
ATG4B-221ENST00000483778 TRAV41A0A0B4J266 112 aa13.97□□□□□ -0.17
ATG4B-221ENST00000483778 ANKRD65E5RJM6 399 aa13.97□□□□□ -0.17
ATG4B-221ENST00000483778 CASQ2O14958 399 aaPredicted RBP13.97□□□□□ -0.17
ATG4B-221ENST00000483778 SOCS1O15524 211 aa13.97□□□□□ -0.17
ATG4B-221ENST00000483778 PROP1O75360 226 aa13.97□□□□□ -0.17
ATG4B-221ENST00000483778 SRMP19623 302 aa13.97□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 90.3 ms