RNA–Protein interactions for RNA: ENST00000483506.1

HDAC6-225, Transcript of histone deacetylase 6, humanhuman

TSL 4

Gene HDAC6, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-225ENST00000483506 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP14.38□□□□□ -0.11
HDAC6-225ENST00000483506 SERTAD4Q9NUC0 356 aa14.38□□□□□ -0.11
HDAC6-225ENST00000483506 NBEAL1Q6ZS30 2694 aa14.38□□□□□ -0.11
HDAC6-225ENST00000483506 SERPINE3A8MV23 424 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 M0QZK8 103 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 ITGB1BP1O14713 200 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 LANCL1O43813 399 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 AMY1AP04745 511 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 AMY2AP04746 511 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 SNRNP70P08621 437 aaKnown RBP14.37□□□□□ -0.11
HDAC6-225ENST00000483506 BLCAPP62952 87 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 ODF3L1Q8IXM7 274 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 CAPSLQ8WWF8 208 aa14.37□□□□□ -0.11
HDAC6-225ENST00000483506 AIREO43918 545 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 SCGNO76038 276 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 SMIM18P0DKX4 95 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 SNRPBP14678 240 aaKnown RBP14.36□□□□□ -0.11
HDAC6-225ENST00000483506 MXD1Q05195 221 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 ARL6IP1Q15041 203 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 Q6ZS46 218 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 SETD6Q8TBK2 473 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 LGALS14Q8TCE9 139 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 WIPF2Q8TF74 440 aaPredicted RBP14.36□□□□□ -0.11
HDAC6-225ENST00000483506 MOB4Q9Y3A3 225 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 ETV7Q9Y603 341 aa14.36□□□□□ -0.11
HDAC6-225ENST00000483506 DIRAS3O95661 229 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 IGKV1D-33P01593 117 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 IGKV1-33P01594 117 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 LPLP06858 475 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 CD3GP09693 182 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 GNB3P16520 340 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 CD1BP29016 333 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 REG1BP48304 166 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 SRSF7Q16629 238 aaKnown RBP eCLIP14.35□□□□□ -0.11
HDAC6-225ENST00000483506 MOB3BQ86TA1 216 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 TGIF2LXQ8IUE1 241 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 LYG1Q8N1E2 194 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 Q8N6K4 173 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 KLHDC1Q8N7A1 406 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 OR2AK2Q8NG84 335 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 OR13F1Q8NGS4 319 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 IL1F10Q8WWZ1 152 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 WNT10AQ9GZT5 417 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 TOLLIPQ9H0E2 274 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 ATG5Q9H1Y0 275 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 IFI27L2Q9H2X8 130 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 VWFP04275 2813 aa14.35□□□□□ -0.11
HDAC6-225ENST00000483506 TRDCB7Z8K6 153 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 FGF16O43320 207 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 FCGR3AP08637 254 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 SCTP09683 121 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 TMEM11P17152 192 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 MRPS15P82914 257 aaKnown RBP14.34□□□□□ -0.11
HDAC6-225ENST00000483506 HERPUD1Q15011 391 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 FAM71F2Q6NXP2 309 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 Q6ZS49 121 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 ZNF833PQ6ZTB9 187 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 CROCCP3Q8IVE0 287 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 SLC23A1Q9UHI7 598 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 CMYA5Q8N3K9 4069 aa14.34□□□□□ -0.11
HDAC6-225ENST00000483506 IGKV1-6A0A0C4DH72 117 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 ZBTB25P24278 435 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 TGFBR1P36897 503 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 OR4A4PQ8NGN8 299 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 SLC25A38Q96DW6 304 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 EAF1Q96JC9 268 aaPredicted RBP14.33□□□□□ -0.12
HDAC6-225ENST00000483506 AGMATQ9BSE5 352 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 CABLES2Q9BTV7 478 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 GHITMQ9H3K2 345 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 RHBDL2Q9NX52 303 aa14.33□□□□□ -0.12
HDAC6-225ENST00000483506 SAA2-SAA4A0A096LPE2 208 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 FABP7O15540 132 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 GSTP1P09211 210 aaKnown RBP14.32□□□□□ -0.12
HDAC6-225ENST00000483506 SAA2P0DJI9 122 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-225ENST00000483506 DTYMKP23919 212 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 VDAC2P45880 294 aaPredicted RBP14.32□□□□□ -0.12
HDAC6-225ENST00000483506 SERPINB10P48595 397 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 LSAMPQ13449 338 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 HES1Q14469 280 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 KIR2DS1Q14954 304 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 ABCA11PQ4W5N1 156 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 IDNKQ5T6J7 187 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 HACD4Q5VWC8 232 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 C5orf56Q8N8D9 126 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 OR5H6Q8NGV6 325 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 OR2T10Q8NGZ9 312 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 EDARADDQ8WWZ3 215 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 ZNF251Q9BRH9 671 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 FUNDC2Q9BWH2 189 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 PARP12Q9H0J9 701 aaKnown RBP14.32□□□□□ -0.12
HDAC6-225ENST00000483506 PIPOXQ9P0Z9 390 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 OR1A1Q9P1Q5 309 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 SPATA2Q9UM82 520 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 WNK1Q9H4A3 2382 aa14.32□□□□□ -0.12
HDAC6-225ENST00000483506 A0A075B6Q4 140 aa14.31□□□□□ -0.12
HDAC6-225ENST00000483506 A0A0A6YYH2 397 aa14.31□□□□□ -0.12
HDAC6-225ENST00000483506 IGHV3-72A0A0B4J1Y9 119 aa14.31□□□□□ -0.12
HDAC6-225ENST00000483506 A6NJ64 397 aa14.31□□□□□ -0.12
HDAC6-225ENST00000483506 MOSP00540 346 aa14.31□□□□□ -0.12
HDAC6-225ENST00000483506 RPS19P39019 145 aaKnown RBP14.31□□□□□ -0.12
Retrieved 100 of 20,778 RNA–protein pairs in 40.2 ms