RNA–Protein interactions for RNA: ENST00000480495.1

TDP2-205, Transcript of tyrosyl-DNA phosphodiesterase 2, humanhuman

TSL 1 (best)

Gene TDP2, Length 714 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP2-205ENST00000480495 C10orf99Q6UWK7 81 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 SVOPQ8N4V2 548 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 COMMD1Q8N668 190 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 Q8N9W7 124 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 WFDC9Q8NEX5 89 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 ABCG5Q9H222 651 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 PLSCR3Q9NRY6 295 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 HSF4Q9ULV5 492 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 MGAT4AQ9UM21 535 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 V9GY05 133 aa11.88□□□□□ -0.51
TDP2-205ENST00000480495 ZNF736B4DX44 427 aaPredicted RBP11.87□□□□□ -0.51
TDP2-205ENST00000480495 AP4M1O00189 453 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 SOCS1O15524 211 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 CD33P20138 364 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 LSAMPQ13449 338 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 KHDC1LQ5JSQ8 128 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 ZNF329Q86UD4 541 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 OR2AK2Q8NG84 335 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 OR51D1Q8NGF3 324 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 FAM3DQ96BQ1 224 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 NOL4LQ96MY1 436 aaPredicted RBP11.87□□□□□ -0.51
TDP2-205ENST00000480495 S1PR3Q99500 378 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 RASL11BQ9BPW5 248 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 GON7Q9BXV9 100 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 STEAP1Q9UHE8 339 aa11.87□□□□□ -0.51
TDP2-205ENST00000480495 TRAV1-2A0A0B4J238 106 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 FOXI3A8MTJ6 420 aaPredicted RBP11.86□□□□□ -0.51
TDP2-205ENST00000480495 PDCD5O14737 125 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 PF4P02776 101 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 GPR12P47775 334 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 SSX1Q16384 188 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 OXLD1Q5BKU9 147 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 CD200R1LQ6Q8B3 271 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 C5orf24Q7Z6I8 188 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 ODF3L1Q8IXM7 274 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 STPG2Q8N412 459 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 OR56B1Q8NGI3 324 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 SETD6Q8TBK2 473 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 IL1F10Q8WWZ1 152 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 Q9H521 79 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 ZFP57Q9NU63 452 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 NDUFB11Q9NX14 153 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 AK3Q9UIJ7 227 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 PLXNB1O43157 2135 aa11.86□□□□□ -0.51
TDP2-205ENST00000480495 LDLRAD4O15165 306 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 GALP22466 123 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 MYL9P24844 172 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 SLC6A1P30531 599 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 VEGFCP49767 419 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 TMEM50BP56557 158 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 CLDN12P56749 244 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 C2orf76Q3KRA6 126 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 FAM71F2Q6NXP2 309 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 ZNF833PQ6ZTB9 187 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 REC114Q7Z4M0 266 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 FAM71E2Q8N5Q1 922 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 NABP2Q9BQ15 211 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 MRPL20Q9BYC9 149 aaKnown RBP11.85□□□□□ -0.51
TDP2-205ENST00000480495 GHITMQ9H3K2 345 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 C12orf4Q9NQ89 552 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 PIPOXQ9P0Z9 390 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 LINC00527Q9UJ94 153 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 RAB22AQ9UL26 194 aa11.85□□□□□ -0.51
TDP2-205ENST00000480495 SAA2-SAA4A0A096LPE2 208 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 TRDV1A0A1B0GX56 115 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 LINC01548A6NM66 108 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 ITGB1BP1O14713 200 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 DENRO43583 198 aaKnown RBP11.84□□□□□ -0.51
TDP2-205ENST00000480495 RRP9O43818 475 aaKnown RBP11.84□□□□□ -0.51
TDP2-205ENST00000480495 SAA2P0DJI9 122 aaPredicted RBP11.84□□□□□ -0.51
TDP2-205ENST00000480495 SOX6P35712 828 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 F2RL1P55085 397 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 RPL23AP62750 156 aaKnown RBP11.84□□□□□ -0.51
TDP2-205ENST00000480495 HLA-DRB3P79483 266 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 HES5Q5TA89 166 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 TEX38Q6PEX7 206 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 Q6ZPA2 131 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 ARHGAP5-AS1Q96IT6 56 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 PECRQ9BY49 303 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 YTHDF1Q9BYJ9 559 aaKnown RBP11.84□□□□□ -0.51
TDP2-205ENST00000480495 IFI27L2Q9H2X8 130 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 SLC23A1Q9UHI7 598 aa11.84□□□□□ -0.51
TDP2-205ENST00000480495 TMEM272A0A1B0GTI8 110 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 RAB29O14966 203 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 OR3A3P47888 321 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 MMDQ15546 238 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 PNLIPRP3Q17RR3 467 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 UBE2UQ5VVX9 321 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 EDARADDQ8WWZ3 215 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 FCGR1BQ92637 280 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 PHF21AQ96BD5 680 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 CMSS1Q9BQ75 279 aaKnown RBP11.83□□□□□ -0.52
TDP2-205ENST00000480495 HDHD3Q9BSH5 251 aaPredicted RBP11.83□□□□□ -0.52
TDP2-205ENST00000480495 Q9N2K0 584 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 NECAP2Q9NVZ3 263 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 ZNF580Q9UK33 172 aa11.83□□□□□ -0.52
TDP2-205ENST00000480495 NOTCH3Q9UM47 2321 aa11.82□□□□□ -0.52
TDP2-205ENST00000480495 IFITM5A6NNB3 132 aa11.82□□□□□ -0.52
TDP2-205ENST00000480495 ST8SIA5O15466 376 aa11.82□□□□□ -0.52
TDP2-205ENST00000480495 HSPA12AO43301 675 aa11.82□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms