RNA–Protein interactions for RNA: ENST00000479510.2

SYNGAP1-206, Transcript of synaptic Ras GTPase activating protein 1, humanhuman

TSL 2

Gene SYNGAP1, Length 2,073 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNGAP1-206ENST00000479510 HOXA5P20719 270 aa20.79■□□□□ 0.92
SYNGAP1-206ENST00000479510 KIAA0141Q14154 515 aaPredicted RBP20.79■□□□□ 0.92
SYNGAP1-206ENST00000479510 IZUMO4Q1ZYL8 232 aa20.79■□□□□ 0.92
SYNGAP1-206ENST00000479510 HAPLN4Q86UW8 402 aa20.79■□□□□ 0.92
SYNGAP1-206ENST00000479510 RSG1Q9BU20 258 aa20.79■□□□□ 0.92
SYNGAP1-206ENST00000479510 WDR61Q9GZS3 305 aaKnown RBP20.79■□□□□ 0.92
SYNGAP1-206ENST00000479510 KCNIP1Q9NZI2 227 aa20.79■□□□□ 0.92
SYNGAP1-206ENST00000479510 ZNF727A8MUV8 499 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 IFNA1P01562 189 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 FBP1P09467 338 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 IAPPP10997 89 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 ARL16Q0P5N6 197 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 FAM90A2PQ658T7 463 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 PNPLA5Q7Z6Z6 429 aaPredicted RBP20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 LILRB2Q8N423 598 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 Q8WTZ3 238 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 TOLLIPQ9H0E2 274 aa20.78■□□□□ 0.92
SYNGAP1-206ENST00000479510 LNP1A1A4G5 178 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 TGOLN2O43493 480 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 CLN5O75503 358 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 FABP1P07148 127 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 MRGPRGQ86SM5 289 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 RCC1LQ96I51 464 aaKnown RBP20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 OR2J1Q9GZK6 312 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 OR51M1Q9H341 326 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 HES4Q9HCC6 221 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 OR14J1Q9UGF5 321 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 IL17BQ9UHF5 180 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 TMEM30CPA0ZSE6 113 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 WDR1O75083 606 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 CD59P13987 128 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 UBE2NP61088 152 aaKnown RBP20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 ZNF766Q5HY98 468 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 CENPVQ7Z7K6 275 aaPredicted RBP20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 ZNF645Q8N7E2 425 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 LOXL4Q96JB6 756 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 ZDHHC11Q9H8X9 412 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 SPRR3Q9UBC9 169 aa20.77■□□□□ 0.92
SYNGAP1-206ENST00000479510 TRAV39A0A0B4J263 110 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 NDUFS6O75380 124 aaKnown RBP20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 S100PP25815 95 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 TMEM14EPQ6UXP3 125 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 FGFRL1Q8N441 504 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 PRR18Q8N4B5 295 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 TCTEX1D1Q8N7M0 179 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 ZNF610Q8N9Z0 462 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 DEFB127Q9H1M4 99 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 NIT2Q9NQR4 276 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 VAX2Q9UIW0 290 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 CDIPTO14735 213 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 ZNF16P17020 682 aaPredicted RBP20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 RND2P52198 227 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 ZNF726P1Q15940 193 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 ATP6V1FQ16864 119 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 GSN-AS1Q9NRJ2 163 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 HSPB7Q9UBY9 170 aa20.76■□□□□ 0.91
SYNGAP1-206ENST00000479510 C1QTNF9BB2RNN3 333 aa20.75■□□□□ 0.91
SYNGAP1-206ENST00000479510 HAND1O96004 215 aa20.75■□□□□ 0.91
SYNGAP1-206ENST00000479510 RAB11AP62491 216 aa20.75■□□□□ 0.91
SYNGAP1-206ENST00000479510 INO80CQ6PI98 192 aaPredicted RBP20.75■□□□□ 0.91
SYNGAP1-206ENST00000479510 CA5BP1Q8WTZ4 195 aa20.75■□□□□ 0.91
SYNGAP1-206ENST00000479510 TAF15Q92804 592 aaKnown RBP eCLIP20.75■□□□□ 0.91
SYNGAP1-206ENST00000479510 OR4C12Q96R67 309 aa20.75■□□□□ 0.91
SYNGAP1-206ENST00000479510 BCL2L14Q9BZR8 327 aa20.75■□□□□ 0.91
SYNGAP1-206ENST00000479510 SPINK2P20155 84 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 CDX1P47902 265 aaPredicted RBP20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 TNFRSF9Q07011 255 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 SLC35E4Q6ICL7 350 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 TMEM178AQ8NBL3 297 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 GALMQ96C23 342 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 ZNF665Q9H7R5 613 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 ERVFRD-1P60508 538 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 SLC38A11Q08AI6 406 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 ZNF674Q2M3X9 581 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 SLC25A40Q8TBP6 338 aa20.74■□□□□ 0.91
SYNGAP1-206ENST00000479510 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 C3orf80F5H4A9 247 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 CXCL1P09341 107 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 P0C879 139 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 SPANXN5Q5MJ07 72 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 LCN15Q6UWW0 184 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 VSIRQ9H7M9 311 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 CFAP54Q96N23 3096 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 ZNF407Q9C0G0 2248 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 OOEPA6NGQ2 149 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 ZFP92A6NM28 416 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 CYB5R3P00387 301 aaPredicted RBP20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 CELA3BP08861 270 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 TUBG1P23258 451 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 CATR1Q13166 79 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 EIF4EBP1Q13541 118 aaPredicted RBP20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 MYPOPQ86VE0 399 aaPredicted RBP20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 CTDSP1Q9GZU7 261 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 TUBG2Q9NRH3 451 aa20.73■□□□□ 0.91
SYNGAP1-206ENST00000479510 WDFY3Q8IZQ1 3526 aa20.72■□□□□ 0.91
SYNGAP1-206ENST00000479510 MAP1LC3B2A6NCE7 125 aa20.72■□□□□ 0.91
SYNGAP1-206ENST00000479510 IDH3GP51553 393 aaPredicted RBP20.72■□□□□ 0.91
SYNGAP1-206ENST00000479510 PRR7Q8TB68 274 aa20.72■□□□□ 0.91
SYNGAP1-206ENST00000479510 MAP1LC3BQ9GZQ8 125 aa20.72■□□□□ 0.91
SYNGAP1-206ENST00000479510 RBKSQ9H477 322 aa20.72■□□□□ 0.91
Retrieved 100 of 20,778 RNA–protein pairs in 49 ms