RNA–Protein interactions for RNA: ENST00000478111.5

TRIM13-208, Transcript of tripartite motif containing 13, humanhuman

TSL 2

Gene TRIM13, Length 478 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM13-208ENST00000478111 LYSTQ99698 3801 aa12.97□□□□□ -0.33
TRIM13-208ENST00000478111 CRTAPO75718 401 aaPredicted RBP12.96□□□□□ -0.33
TRIM13-208ENST00000478111 CHATP28329 748 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 OR3A3P47888 321 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 INSL3P51460 131 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 HTD2P86397 168 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 LY6G6FQ5SQ64 297 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 C6orf141Q5SZD1 244 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 ZNF833PQ6ZTB9 187 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 MINDY2Q8NBR6 621 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 OR5B12Q96R08 314 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 JPT1Q9UK76 154 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 VSIG4Q9Y279 399 aa12.96□□□□□ -0.33
TRIM13-208ENST00000478111 STARD9Q9P2P6 4700 aa12.96□□□□□ -0.34
TRIM13-208ENST00000478111 YPEL1O60688 119 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 PDCD6O75340 191 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 NDUFA3O95167 84 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 OR8U8P0C7N1 319 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 BLVRBP30043 206 aaPredicted RBP12.95□□□□□ -0.34
TRIM13-208ENST00000478111 CAPGP40121 348 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 RAB9AP51151 201 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 ZNF616Q08AN1 781 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 ST3GAL4Q11206 333 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 C5orf64Q2M2E5 130 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 C19orf54Q5BKX5 351 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 LAIR2Q6ISS4 152 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 TMEM65Q6PI78 240 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 NPBQ8NG41 125 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 YPEL2Q96QA6 119 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 FBXO7Q9Y3I1 522 aa12.95□□□□□ -0.34
TRIM13-208ENST00000478111 DNAH1Q9P2D7 4330 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 TRAV41A0A0B4J266 112 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 PNMA8CA0A1B0GUJ8 204 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 NBR2O15453 112 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 SOX15O60248 233 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 BAG2O95816 211 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 CD1AP06126 327 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 NDPQ00604 133 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 LRRC36Q1X8D7 754 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 DCUN1D4Q92564 292 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 FAM46BQ96A09 425 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 SULT4A1Q9BR01 284 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 ZNF251Q9BRH9 671 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 PARP11Q9NR21 331 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 TPSG1Q9NRR2 321 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 CHCHD3Q9NX63 227 aaKnown RBP12.94□□□□□ -0.34
TRIM13-208ENST00000478111 KCNIP1Q9NZI2 227 aa12.94□□□□□ -0.34
TRIM13-208ENST00000478111 SAA2-SAA4A0A096LPE2 208 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 C3orf84H3BNL1 204 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 SAA2P0DJI9 122 aaPredicted RBP12.93□□□□□ -0.34
TRIM13-208ENST00000478111 CELP19835 753 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 HMGN3Q15651 99 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 TTC23Q5W5X9 447 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 LIN54Q6MZP7 749 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 UQCC2Q9BRT2 126 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 ALX4Q9H161 411 aaPredicted RBP12.93□□□□□ -0.34
TRIM13-208ENST00000478111 IFI27L2Q9H2X8 130 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 SMAD5-AS1Q9Y6J3 95 aa12.93□□□□□ -0.34
TRIM13-208ENST00000478111 EFCAB10A6NFE3 127 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 EGR2P11161 476 aaPredicted RBP12.92□□□□□ -0.34
TRIM13-208ENST00000478111 CRIP2P52943 208 aaPredicted RBP12.92□□□□□ -0.34
TRIM13-208ENST00000478111 TAS2R43P59537 309 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 MED21Q13503 144 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 INSL4Q14641 139 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 OR10K2Q6IF99 312 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 ZNF429Q86V71 674 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 SBSPONQ8IVN8 264 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 NKAIN3Q8N8D7 197 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 CYGBQ8WWM9 190 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 DLX4Q92988 240 aaPredicted RBP12.92□□□□□ -0.34
TRIM13-208ENST00000478111 GHRLQ9UBU3 117 aa12.92□□□□□ -0.34
TRIM13-208ENST00000478111 EPPK1P58107 5090 aaKnown RBP12.91□□□□□ -0.34
TRIM13-208ENST00000478111 OVOL1O14753 267 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 RGS11O94810 467 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 LY86O95711 162 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 SETD9Q8NE22 299 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 OR2AK2Q8NG84 335 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 CASTOR1Q8WTX7 329 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 GALMQ96C23 342 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 FAAP24Q9BTP7 215 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 TOLLIPQ9H0E2 274 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 ISYNA1Q9NPH2 558 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 LRRC42Q9Y546 428 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 NUBP2Q9Y5Y2 271 aa12.91□□□□□ -0.34
TRIM13-208ENST00000478111 FCN1O00602 326 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 ST8SIA5O15466 376 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 NAPSAO96009 420 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 CT45A6P0DMU7 189 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 CT45A5P0DMU8 189 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 CT45A7P0DMV0 189 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 SLURP1P55000 103 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 WNT4P56705 351 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 RPS27AP62979 156 aaKnown RBP12.9□□□□□ -0.34
TRIM13-208ENST00000478111 CX3CL1P78423 397 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 ECSCRQ19T08 205 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 ZNF660Q6AZW8 331 aaPredicted RBP12.9□□□□□ -0.34
TRIM13-208ENST00000478111 FAM71F2Q6NXP2 309 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 ZNF880Q6PDB4 577 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 FAM131AQ6UXB0 335 aa12.9□□□□□ -0.34
TRIM13-208ENST00000478111 C6orf201Q7Z4U5 140 aa12.9□□□□□ -0.34
Retrieved 100 of 20,778 RNA–protein pairs in 30.3 ms